RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Nlrc3Q5DU56 1064 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Slc39a12Q5FWH7 689 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 IspdQ5RJG7 447 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp595Q8BIN6 625 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Myoz3Q8R4E4 245 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1475Q8VEV6 314 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cdkal1Q91WE6 578 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Mgat4dQ9D4R2 373 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tomm20Q9DCC8 145 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 RbmxQ9WV02 391 aaKnown RBP16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Rbbp9O88851 186 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Hbb-bh0P04443 147 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Lamp2P17047 415 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Arl5aQ80ZU0 179 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Xylt1Q811B1 953 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cdk6Q64261 326 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Thumpd1Q99J36 350 aaKnown RBP16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ovca2Q9D7E3 225 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gsk3bQ9WV60 420 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm17949A0A1B0GRV7 212 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Pxmp2P42925 194 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 TceancQ3US16 359 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm11487Q5RIS0 354 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zmiz1Q6P1E1 1072 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zpbp2Q6X786 326 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zim1Q8C393 579 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr134Q8VG95 312 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 AmnQ99JB7 458 aaKnown RBP16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Bhlhe41Q99PV5 410 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tmprss6Q9DBI0 811 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 BC024978J3QPC3 361 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tas2r123P59528 333 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Nipal4Q8BZF2 406 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zbtb48Q1H9T6 681 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 GapdhsQ64467 440 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fgfr3Q61851 801 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Lingo3Q6GQU6 589 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Lrrtm4Q80XG9 590 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Lrrc20Q8CI70 184 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Leng1Q9DB98 261 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Psmd13Q9WVJ2 376 aa16.07■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm4131A0A140LJ24 318 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Sppl2bQ3TD49 578 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fam71f1Q3UZD7 341 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm5346Q7M766 736 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 FukQ7TMC8 1090 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Prdm9Q96EQ9 843 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp992B1ASD8 573 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tbxas1P36423 533 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 ClpbQ60649 677 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Q6P1I3 445 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tas2r117Q7M715 330 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp790Q80ZX2 779 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 EfhbQ8CDU5 853 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gatad2aQ8CHY6 629 aaKnown RBP16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp991Q8R1N3 573 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Lgals2Q9CQW5 130 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Slc39a5Q9D856 535 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp708F8VPP0 541 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1564K7N6V7 318 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Pias1O88907 651 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tmem181aQ3U3W2 474 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Timm8a2Q4FZG7 97 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 IppkQ6P1C1 489 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr350Q8VFP8 312 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gstt3Q99L20 241 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Nfs1Q9Z1J3 459 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 HexaP29416 528 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Nipal3Q8BGN5 410 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr61Q8VGM2 311 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Mrpl15Q9CPR5 295 aaKnown RBP16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Spaca1Q9DA48 305 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 NckipsdQ9ESJ4 714 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Myo7aP97479 2215 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Vmn2r114E9Q281 856 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fubp3Q3TIX6 575 aaKnown RBP16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ctc1Q5SUQ9 1212 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1231Q7TQZ8 313 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Grip1Q925T6 1127 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Snap29Q9ERB0 260 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Adam24Q9R160 761 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gml2G5E8L7 176 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Galr2O88854 371 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Esr1P19785 599 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tusc3Q8BTV1 347 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ccm2Q8K2Y9 453 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tmem5Q8VDX6 444 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tle3Q08122 772 aaKnown RBP16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Stoml3Q6PE84 287 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fam110bQ8C739 366 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fam173bQ9D1Z3 247 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp869Q9DC47 529 aa16.06■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp981A2A8V7 445 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 EporP14753 507 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Rps2P25444 293 aaKnown RBP16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Mcph1Q7TT79 822 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Map1sQ8C052 973 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cep41Q99NF3 373 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ms4a4bQ9ES61 226 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Dclk1Q9JLM8 756 aa16.05■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms