RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 EPHA6Q9UF33 1036 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 LEPRP48357 1165 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 PITPNBP48739 271 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 MAL2Q969L2 176 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 IL4I1Q96RQ9 567 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 IGFLR1Q9H665 355 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 MPPED1O15442 326 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 CRYZL1O95825 349 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 MLLT3P42568 568 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 UGT3A2Q3SY77 523 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 ZNF574Q6ZN55 896 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 ANKK1Q8NFD2 765 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 MYLIPQ8WY64 445 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 HS6ST2Q96MM7 605 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 ETV6P41212 452 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 HABP2Q14520 560 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 LIX1LQ8IVB5 337 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 SUMF2Q8NBJ7 301 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 C3orf58Q8NDZ4 430 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 OR2AP1Q8NGE2 309 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 LENG8Q96PV6 779 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 G6PC3Q9BUM1 346 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 EBPLQ9BY08 206 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 SLC25A51Q9H1U9 297 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 RAI2Q9Y5P3 530 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 CSNK2A2P19784 350 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 WSCD1Q658N2 575 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 NOXRED1Q6NXP6 359 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 TRAM1L1Q8N609 369 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 APMAPQ9HDC9 416 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 FMN2Q9NZ56 1722 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 PCDH7O60245 1069 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 GJB6O95452 261 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 KCNJ5P48544 419 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 ATXN7L3Q14CW9 347 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 EXOSC6Q5RKV6 272 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 IDO2Q6ZQW0 420 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 NTAN1Q96AB6 310 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 TBX5Q99593 518 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 RPS10P5Q9NQ39 176 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 VPS29Q9UBQ0 182 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 MYO3AQ8NEV4 1616 aa18.75■□□□□ 0.59
CACNA1A-257ENST00000638009 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 MANSC4A6NHS7 340 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 EI24O14681 340 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CAPN5O15484 640 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 RNF13O43567 381 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 FADS1O60427 444 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CAPN15O75808 1086 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 SYNGR4O95473 234 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 LRP8Q14114 963 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 TAF1AQ15573 450 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 ZFP82Q8N141 532 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 OR13C3Q8NGS6 347 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 DEC1Q9P2X7 70 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 C12orf71A8MTZ7 269 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CTNNB1P35222 781 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 PYURFQ96I23 114 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 SLC28A3Q9HAS3 691 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 WNK2Q9Y3S1 2297 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 SCGB1D1O95968 90 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 KLK3P07288 261 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 FOXK1P85037 733 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 GALK2Q01415 458 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 TMEM119Q4V9L6 283 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 PFKLP17858 780 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 PLGLAQ15195 96 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 COQ5Q5HYK3 327 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 SLC22A25Q6T423 547 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 LURAP1Q96LR2 239 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CREB1P16220 341 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CD9P21926 228 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 RFTN1Q14699 578 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 METTL11BQ5VVY1 283 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 SLC9A9Q8IVB4 645 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 TOP6BLQ8N6T0 577 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CHAC2Q8WUX2 184 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CNOT9Q92600 299 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 HNRNPABQ99729 332 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 TAS2R30P59541 319 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 RAB39BQ96DA2 213 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 BIRC8Q96P09 236 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 TPT1P8Q9HAU6 139 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 GLTPQ9NZD2 209 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 TMEM94Q12767 1356 aa18.74■□□□□ 0.59
CACNA1A-257ENST00000638009 CLIC1O00299 241 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 EPHX2P34913 555 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 GRHL3Q8TE85 626 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 B4GALT7Q9UBV7 327 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 MAP2K3P46734 347 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 HSPA7P48741 367 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 EPHA10Q5JZY3 1008 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 CLEC6AQ6EIG7 209 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 EGFL6Q8IUX8 553 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 PMEPA1Q969W9 287 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 ALPK1Q96QP1 1244 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 LGMNQ99538 433 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms