RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 WDPCPO95876 746 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 IGHEP01854 428 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 SERPINA7P05543 415 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 C8GP07360 202 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 TROVE2P10155 538 aaKnown RBP eCLIP7.39□□□□□ -1.23
PNKP-229ENST00000637897 NEFHP12036 1026 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 MST1P26927 711 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 TYK2P29597 1187 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 ALDH3A1P30838 453 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 GDF5P43026 501 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 TSFMP43897 325 aaKnown RBP7.39□□□□□ -1.23
PNKP-229ENST00000637897 SCTRP47872 440 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 GLRBP48167 497 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 SERPINB4P48594 390 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 OLR1P78380 273 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 OCA2Q04671 838 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 SP140Q13342 867 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 BMPR2Q13873 1038 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 FBXO48Q5FWF7 155 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 FHL5Q5TD97 284 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 AGAP7PQ5VUJ5 663 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 ATG16L1Q676U5 607 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 H3F3CQ6NXT2 135 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 ISLR2Q6UXK2 745 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 VN1R5Q7Z5H4 357 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 ADCK2Q7Z695 626 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 ANKRD37Q7Z713 158 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 LCA5Q86VQ0 697 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 ZNF227Q86WZ6 799 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 SPATA6LQ8N4H0 392 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 ZADH2Q8N4Q0 377 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 EFCAB3Q8N7B9 438 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 GPATCH11Q8N954 259 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 PRR7Q8TB68 274 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 ZCCHC10Q8TBK6 192 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 DNAJB14Q8TBM8 379 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 CREB3L4Q8TEY5 395 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 SSC4DQ8WTU2 575 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 FBXL8Q96CD0 374 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 AGAP4Q96P64 663 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 LMF1Q96S06 567 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 SLX1AQ9BQ83 275 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 RBCK1Q9BYM8 510 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 CCDC68Q9H2F9 335 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 MKKSQ9NPJ1 570 aaPredicted RBP7.39□□□□□ -1.23
PNKP-229ENST00000637897 UTP6Q9NYH9 597 aaKnown RBP7.39□□□□□ -1.23
PNKP-229ENST00000637897 PTGFRNQ9P2B2 879 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 PLEKHB1Q9UF11 243 aaPredicted RBP7.39□□□□□ -1.23
PNKP-229ENST00000637897 MKL2Q9ULH7 1088 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 MTO1Q9Y2Z2 717 aaKnown RBP7.39□□□□□ -1.23
PNKP-229ENST00000637897 COPG1Q9Y678 874 aaKnown RBP7.39□□□□□ -1.23
PNKP-229ENST00000637897 CELSR2Q9HCU4 2923 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 NSG1A0A0A6YYJ2 146 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 FAM95CA0A1B0GW59 222 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 A1L4Q6 167 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 NPEPPSL1A6NEC2 478 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 ANKUB1A6NFN9 424 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 GALR3O60755 368 aaPredicted RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 IPO13O94829 963 aaKnown RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 SEC24DO94855 1032 aaPredicted RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 TGDSO95455 350 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 GUCA1CO95843 209 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 ALDOAP04075 364 aaKnown RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 CD22P20273 847 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 VARSP26640 1264 aaKnown RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 MAGEA12P43365 314 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 XCR1P46094 333 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 SLC6A12P48065 614 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 TNFSF10P50591 281 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 HNRNPFP52597 415 aaKnown RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 RPS15AP62244 130 aaKnown RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 REEP5Q00765 189 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 DLG1Q12959 904 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 ZNF169Q14929 603 aaPredicted RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 TSNQ15631 228 aaKnown RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 CCDC153Q494R4 210 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 THEMIS2Q5TEJ8 643 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 ZNF468Q5VIY5 522 aaPredicted RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 FCRLBQ6BAA4 426 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 CAPN13Q6MZZ7 669 aaPredicted RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 FAM47EQ6ZV65 393 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 TRPM8Q7Z2W7 1104 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 CCDC91Q7Z6B0 441 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 ASPGQ86U10 573 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 C17orf64Q86WR6 236 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 KBTBD2Q8IY47 623 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 KLHDC8AQ8IYD2 350 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 MYO1HQ8N1T3 1032 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 CCDC63Q8NA47 563 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 ST6GALNAC3Q8NDV1 305 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 TMEM52Q8NDY8 209 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 PLPP5Q8NEB5 264 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 MCOLN3Q8TDD5 553 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 UTP15Q8TED0 518 aaKnown RBP7.38□□□□□ -1.23
PNKP-229ENST00000637897 FAR1Q8WVX9 515 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 SLC13A3Q8WWT9 602 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 CCT6BQ92526 530 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 HAS2Q92819 552 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 THAP11Q96EK4 314 aa7.38□□□□□ -1.23
PNKP-229ENST00000637897 VPS39Q96JC1 886 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms