RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 GPR143P51810 404 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 IL2P60568 153 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 GPR85P60893 370 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 CSHL1Q14406 222 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 TERF2Q15554 542 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 PPP1R3AQ16821 1122 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 SBSNQ6UWP8 590 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 SCUBE1Q8IWY4 988 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 CYP4Z2PQ8N1L4 340 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 CA13Q8N1Q1 262 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 B3GNT7Q8NFL0 401 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 OR52N2Q8NGI0 321 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 CREB3L4Q8TEY5 395 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 UCK2Q9BZX2 261 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 RHBGQ9H310 441 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 DEPPQ9NTK1 212 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 RNF6Q9Y252 685 aa11.31□□□□□ -0.6
CACNA1A-250ENST00000637809 PINLYPA6NC86 204 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 PSMD12O00232 456 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 PRKNO60260 465 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 BANF1O75531 89 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 ITGA10O75578 1167 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 PDE9AO76083 593 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 MYO1DO94832 1006 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 GUCA1CO95843 209 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 SERPINA6P08185 405 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 ENO2P09104 434 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 MSX1P28360 303 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 CLCN2P51788 898 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 MSS51Q4VC12 460 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 RNASEH2BQ5TBB1 312 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 HECTD2Q5U5R9 776 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 TMEM211Q6ICI0 200 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 ARHGAP11AQ6P4F7 1023 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 NXPE4Q6UWF7 544 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 C16orf47Q6ZP98 133 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 GALNT7Q86SF2 657 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 IGDCC3Q8IVU1 814 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 DMRTC2Q8IXT2 367 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 PPIL6Q8IXY8 311 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 TRPV3Q8NET8 790 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 ASB5Q8WWX0 329 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 ATL1Q8WXF7 558 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 TP63Q9H3D4 680 aaPredicted RBP11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 PELI2Q9HAT8 420 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 MMACHCQ9Y4U1 282 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 SCN3AQ9NY46 2000 aa11.3□□□□□ -0.6
CACNA1A-250ENST00000637809 URADA6NGE7 173 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 FAM90A27PA6NNH2 459 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 NRDCO43847 1150 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 TTC4O95801 387 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 HNRNPFP52597 415 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 BTN3A2P78410 334 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 RUNX2Q13950 521 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 RBBP5Q15291 538 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 XKR6Q5GH73 641 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 TOR1AIP1Q5JTV8 583 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 SPANXN3Q5MJ09 141 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 TEDDM1Q5T9Z0 273 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 TMPRSS11BQ86T26 416 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 THOC6Q86W42 341 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 CCDC71Q8IV32 467 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 TMEM156Q8N614 296 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 TMEM52Q8NDY8 209 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 ARMC2Q8NEN0 867 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 RND1Q92730 232 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 VMP1Q96GC9 406 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 PDLIM5Q96HC4 596 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 SEC16BQ96JE7 1060 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 AIF1LQ9BQI0 150 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 TRIM54Q9BYV2 358 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 ZDHHC11Q9H8X9 412 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 KCMF1Q9P0J7 381 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 FBXW2Q9UKT8 454 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 SLC22A14Q9Y267 594 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 VWA7Q9Y334 891 aa11.29□□□□□ -0.6
CACNA1A-250ENST00000637809 VPS13CQ709C8 3753 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 A0A1W2PRS3 328 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 FOXO6A8MYZ6 492 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 GLSO94925 669 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 TUBB4AP04350 444 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 HOXD4P09016 255 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 CD1EP15812 388 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 HNRNPH1P31943 449 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 SSR4P51571 173 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 NUP107P57740 925 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 PMPCAQ10713 525 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 GPATCH11Q8N954 259 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 PSD4Q8NDX1 1056 aa11.28□□□□□ -0.6
CACNA1A-250ENST00000637809 NCLNQ969V3 563 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms