RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 PLXDC1Q8IUK5 500 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 ACOT4Q8N9L9 421 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 OR8J2Q8NGG1 315 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 OR8K5Q8NH50 307 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 COQ8BQ96D53 544 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 TBCDQ9BTW9 1192 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 REEP4Q9H6H4 257 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 NDE1Q9NXR1 346 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 PACSIN3Q9UKS6 424 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 ERVK-11Q9UQG0 969 aa20.04■□□□□ 0.8
CLN8-213ENST00000637156 ARHGAP10A1A4S6 786 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 SORBS2O94875 1100 aaKnown RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 C9P02748 559 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 IL3P08700 152 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 FURINP09958 794 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 HIST1H1TP22492 207 aaPredicted RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 KIR3DL1P43629 444 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 VSX2P58304 361 aaPredicted RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 NFYCQ13952 458 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 COL9A2Q14055 689 aaPredicted RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 MANEAQ5SRI9 462 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 WDR74Q6RFH5 385 aaPredicted RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 DBX2Q6ZNG2 339 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 GPR180Q86V85 440 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 SCUBE1Q8IWY4 988 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 ULK2Q8IYT8 1036 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 MMP21Q8N119 569 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 CD180Q99467 661 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 HOPXQ9BPY8 73 aaPredicted RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 SERHLQ9NQF3 203 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 STARD5Q9NSY2 213 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 ATP6V1HQ9UI12 483 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 LNP1A1A4G5 178 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 ZNF888P0CJ79 500 aaPredicted RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 TSFMP43897 325 aaKnown RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 GABRA4P48169 554 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 ATXN3P54252 364 aaPredicted RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 BTN3A2P78410 334 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 SLAMF1Q13291 335 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 CAPRIN1Q14444 709 aaKnown RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 PRSS53Q2L4Q9 553 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 DPY19L1Q2PZI1 675 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 PROX2Q3B8N5 592 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 ZC3H12BQ5HYM0 836 aaKnown RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 CPTPQ5TA50 214 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 CAMKMTQ7Z624 323 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 GAL3ST3Q96A11 431 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 GID8Q9NWU2 228 aa20.03■□□□□ 0.8
CLN8-213ENST00000637156 WBP11Q9Y2W2 641 aaKnown RBP20.03■□□□□ 0.8
CLN8-213ENST00000637156 RP1P56715 2156 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 ZSCAN9O15535 394 aaPredicted RBP20.02■□□□□ 0.8
CLN8-213ENST00000637156 RASSF9O75901 435 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 NPPAP01160 153 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 SQSTM1Q13501 440 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 PDE7AQ13946 482 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 WASHC2DQ5SRD0 308 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 MRM1Q6IN84 353 aaKnown RBP20.02■□□□□ 0.8
CLN8-213ENST00000637156 ANKRD46Q86W74 232 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 ZCCHC7Q8N3Z6 543 aaKnown RBP20.02■□□□□ 0.8
CLN8-213ENST00000637156 CSNK1A1LQ8N752 337 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 FAM13CQ8NE31 585 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 NUDT22Q9BRQ3 303 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 CHRNA10Q9GZZ6 450 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 SH3BP4Q9P0V3 963 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 SLC7A8Q9UHI5 535 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 MAPRE3Q9UPY8 281 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 MRPS2Q9Y399 296 aaKnown RBP20.02■□□□□ 0.8
CLN8-213ENST00000637156 ASB4Q9Y574 426 aa20.02■□□□□ 0.8
CLN8-213ENST00000637156 A0A1W2PQM1 296 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 SRPX2O60687 465 aaPredicted RBP20.01■□□□□ 0.79
CLN8-213ENST00000637156 ZBTB11O95625 1053 aaPredicted RBP20.01■□□□□ 0.79
CLN8-213ENST00000637156 FAM58BPP0C7Q3 252 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 CKMT1AP12532 417 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 SLC6A2P23975 617 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 SLC9A5Q14940 896 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 TRMT5Q32P41 509 aaKnown RBP20.01■□□□□ 0.79
CLN8-213ENST00000637156 ZNF385BQ569K4 471 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 LAIR1Q6GTX8 287 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 TMEM214Q6NUQ4 689 aaKnown RBP20.01■□□□□ 0.79
CLN8-213ENST00000637156 ZNF574Q6ZN55 896 aaPredicted RBP20.01■□□□□ 0.79
CLN8-213ENST00000637156 IKBIPQ70UQ0 350 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 TMPRSS9Q7Z410 1059 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 KIAA2013Q8IYS2 634 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 FBXW8Q8N3Y1 598 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 SUMF1Q8NBK3 374 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 DNAJB14Q8TBM8 379 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 STARD8Q92502 1023 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 UCN3Q969E3 161 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 PRPF18Q99633 342 aaKnown RBP20.01■□□□□ 0.79
CLN8-213ENST00000637156 CCDC3Q9BQI4 270 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 DUSP26Q9BV47 211 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 PDE7BQ9NP56 450 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 TEX10Q9NXF1 929 aaPredicted RBP20.01■□□□□ 0.79
CLN8-213ENST00000637156 SEMA5BQ9P283 1151 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 URADA6NGE7 173 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 PDE5AO76074 875 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 CERS1P27544 350 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 MTTPP55157 894 aa20.01■□□□□ 0.79
CLN8-213ENST00000637156 TRA2BP62995 288 aaKnown RBP20.01■□□□□ 0.79
CLN8-213ENST00000637156 MPEG1Q2M385 716 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms