RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MANEALQ5VSG8 457 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 TTC23Q5W5X9 447 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 SEL1L3Q68CR1 1132 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 TXNRD3NBQ6F5E7 133 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 TMEM211Q6ICI0 200 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 OR5M10Q6IEU7 315 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 C17orf99Q6UX52 265 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 SLC39A5Q6ZMH5 540 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 LRRC74BQ6ZQY2 392 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 SPATA31D4Q6ZUB0 917 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 Q6ZUG5 572 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 ABHD12BQ7Z5M8 362 aaPredicted RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 CATSPERDQ86XM0 798 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 ZNF280BQ86YH2 543 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 HIPK1Q86Z02 1210 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 GID4Q8IVV7 300 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 AQP12AQ8IXF9 295 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 C4orf19Q8IY42 314 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 MICU2Q8IYU8 434 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 CDK20Q8IZL9 346 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 NLGN4XQ8N0W4 816 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 CERS5Q8N5B7 392 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 TRAM1L1Q8N609 369 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 METTL25Q8N6Q8 603 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 GATSQ8NAP1 163 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 CYB561A3Q8NBI2 242 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 COLGALT1Q8NBJ5 622 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 OR4D6Q8NGJ1 314 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 OR5D18Q8NGL1 313 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 OR4C15Q8NGM1 316 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 OR6Q1Q8NGQ2 317 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 ASB15Q8WXK1 588 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 ELMO1Q92556 727 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 OSTF1Q92882 214 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 EMG1Q92979 244 aaKnown RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 FAM46BQ96A09 425 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 REPS1Q96D71 796 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 B3GALT6Q96L58 329 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 DUX5Q96PT3 197 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 SLITRK1Q96PX8 696 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 RANBP9Q96S59 729 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 NAT9Q9BTE0 207 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 FNDC11Q9BVV2 318 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 DGCR6LQ9BY27 220 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 MRPL13Q9BYD1 178 aaKnown RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 TM6SF2Q9BZW4 377 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 STRADBQ9C0K7 418 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 OR2B2Q9GZK3 357 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 CTDSP1Q9GZU7 261 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 OR2AG1Q9H205 316 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 ZNF768Q9H5H4 540 aaKnown RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 PDZD7Q9H5P4 517 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 EPHX3Q9H6B9 360 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 CCDC134Q9H6E4 229 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 SLC38A10Q9HBR0 1119 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 SGK2Q9HBY8 427 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 HHATLQ9HCP6 504 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 INIPQ9NRY2 104 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 SAMSN1Q9NSI8 373 aaKnown RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 ZNF701Q9NV72 531 aaPredicted RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 INTS9Q9NV88 658 aaKnown RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 EXD2Q9NVH0 621 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 PLEK2Q9NYT0 353 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 NDUFA13Q9P0J0 144 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 DLGAP2Q9P1A6 1054 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 SLC17A7Q9P2U7 560 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 RHCGQ9UBD6 479 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 ARPP21Q9UBL0 812 aaPredicted RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 IL17BQ9UHF5 180 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 NOCTQ9UK39 431 aaKnown RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 RASD1Q9Y272 281 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 EXOGQ9Y2C4 368 aaKnown RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 CMAHPQ9Y471 501 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 TIMM13Q9Y5L4 95 aaPredicted RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 SLCO1B1Q9Y6L6 691 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 ABCC4O15439 1325 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 MYBBP1AQ9BQG0 1328 aaKnown RBP2.87□□□□□ -1.95
VIM-210ENST00000637053 NACADO15069 1562 aa2.87□□□□□ -1.95
VIM-210ENST00000637053 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 A0A0U1RRA0 63 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 A0A1W2PPM1 405 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 FBLL1A6NHQ2 334 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 AGAP5A6NIR3 686 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PCP4L1A6NKN8 68 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 AQP7P3A6NL99 342 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SRRM3A6NNA2 597 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 MARCH11A6NNE9 402 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 FAM90A27PA6NNH2 459 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ERI2A8K979 691 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 MAGEB17A8MXT2 336 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 C2orf74A8MZ97 194 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 KLRC4-KLRK1H3BQV0 150 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TEX46H3BTG2 121 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TRIM77I1YAP6 450 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 LAD1O00515 517 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PPP6CO00743 305 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 WNT10BO00744 389 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SLC9A3R1O14745 358 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 KLF11O14901 512 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CTDSPLO15194 276 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms