RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TCAF1Q9Y4C2 921 aa16.8■□□□□ 0.28
CLN6-212ENST00000636020 CES2O00748 559 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 NIPSNAP2O75323 286 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 OR2J2O76002 312 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 MYO1DO94832 1006 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 B3GALT4O96024 378 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 F12P00748 615 aaPredicted RBP16.79■□□□□ 0.28
CLN6-212ENST00000636020 SLC35G6P0C7Q6 338 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 PTMSP20962 102 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 GRIA1P42261 906 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 GPR143P51810 404 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 UBASH3AP57075 661 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 RPS6KA1Q15418 735 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 ZNF750Q32MQ0 723 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 MPP5Q8N3R9 675 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 ZNF740Q8NDX6 193 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 SMPDL3BQ92485 455 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 VMP1Q96GC9 406 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 CAPZA3Q96KX2 299 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 SECISBP2Q96T21 854 aaKnown RBP16.79■□□□□ 0.28
CLN6-212ENST00000636020 AARSD1Q9BTE6 412 aaKnown RBP16.79■□□□□ 0.28
CLN6-212ENST00000636020 EXO5Q9H790 373 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 LIN28AQ9H9Z2 209 aaKnown RBP16.79■□□□□ 0.28
CLN6-212ENST00000636020 INTUQ9ULD6 942 aa16.79■□□□□ 0.28
CLN6-212ENST00000636020 ZFAND5O76080 213 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 FMO4P31512 558 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 PTPN7P35236 360 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 SOX3P41225 446 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 ZNF136P52737 540 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 TRIM14Q14142 442 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 IQCB1Q15051 598 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 TERF2Q15554 542 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 DEFB134Q4QY38 66 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 PODNL1Q6PEZ8 512 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 REXO1L1PQ8IX06 675 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 DACH2Q96NX9 599 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 RASL10BQ96S79 203 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 DNAJC7Q99615 494 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 CHP1Q99653 195 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 TUBA8Q9NY65 449 aaPredicted RBP16.78■□□□□ 0.28
CLN6-212ENST00000636020 ZFATQ9P243 1243 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 SH2B3Q9UQQ2 575 aa16.78■□□□□ 0.28
CLN6-212ENST00000636020 KIAA1549Q9HCM3 1950 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 MBD3L4A6NDZ8 208 aaPredicted RBP16.77■□□□□ 0.28
CLN6-212ENST00000636020 MBD3L5A6NJ08 208 aaPredicted RBP16.77■□□□□ 0.28
CLN6-212ENST00000636020 KDM4EB2RXH2 506 aaPredicted RBP16.77■□□□□ 0.28
CLN6-212ENST00000636020 CLDN4O14493 209 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 EPPINO95925 133 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 SYF2O95926 243 aaKnown RBP16.77■□□□□ 0.28
CLN6-212ENST00000636020 ALOX12P18054 663 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 IMPA1P29218 277 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 TIMP3P35625 211 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 DNASE1L1P49184 302 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 GDF10P55107 478 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 WNT3P56703 355 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 KRTAP1-1Q07627 177 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 RTL4Q6ZR62 310 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 MFSD9Q8NBP5 474 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 OR8K1Q8NGG5 319 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 NCLNQ969V3 563 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 CCDC77Q9BR77 488 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 SEMA4BQ9NPR2 832 aaPredicted RBP16.77■□□□□ 0.28
CLN6-212ENST00000636020 MYOTQ9UBF9 498 aa16.77■□□□□ 0.28
CLN6-212ENST00000636020 ERI2A8K979 691 aaKnown RBP16.76■□□□□ 0.27
CLN6-212ENST00000636020 CNOT4O95628 575 aaKnown RBP16.76■□□□□ 0.27
CLN6-212ENST00000636020 SKIV2L2P42285 1042 aaKnown RBP16.76■□□□□ 0.27
CLN6-212ENST00000636020 SKP1P63208 163 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 ACSF3Q4G176 576 aaPredicted RBP16.76■□□□□ 0.27
CLN6-212ENST00000636020 NIPAL1Q6NVV3 410 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 PPP1R21Q6ZMI0 780 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 FAM47EQ6ZV65 393 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 ASB11Q8WXH4 323 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 PERPQ96FX8 193 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 SCYL1Q96KG9 808 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 CCDC42Q96M95 316 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 EPB41L4BQ9H329 900 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 NHEJ1Q9H9Q4 299 aaPredicted RBP16.76■□□□□ 0.27
CLN6-212ENST00000636020 CHRAC1Q9NRG0 131 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 JKAMPQ9P055 326 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 SAMD15Q9P1V8 674 aa16.76■□□□□ 0.27
CLN6-212ENST00000636020 AHRRA9YTQ3 701 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 H3BMM5 538 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 GFYI3L273 518 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 TJP3O95049 919 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 IFNA2P01563 188 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 IL2RAP01589 272 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 CHRM3P20309 590 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 HECTD2Q5U5R9 776 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 AADACL2Q6P093 401 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 LACC1Q8IV20 430 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 GOLM1Q8NBJ4 401 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 LPGAT1Q92604 370 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 PDLIM2Q96JY6 352 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 CLK4Q9HAZ1 481 aaKnown RBP16.75■□□□□ 0.27
CLN6-212ENST00000636020 CCDC177Q9NQR7 707 aaPredicted RBP16.75■□□□□ 0.27
CLN6-212ENST00000636020 SACM1LQ9NTJ5 587 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 ATG4BQ9Y4P1 393 aa16.75■□□□□ 0.27
CLN6-212ENST00000636020 WWP2O00308 870 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 NDUFS4O43181 175 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 CEP104O60308 925 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms