RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PRPF19Q9UMS4 504 aaKnown RBP13.75□□□□□ -0.21
LINC00339-208ENST00000634934 CCDC187A0A096LP49 1063 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 SLC28A1O00337 649 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 TXNDC9O14530 226 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 CASQ2O14958 399 aaPredicted RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ETHE1O95571 254 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 MSL3P1P0C860 447 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ZNF33BQ06732 778 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 CSTF3Q12996 717 aaKnown RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 VWA5B1Q5TIE3 1220 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 KHDRBS2Q5VWX1 349 aaKnown RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 OR52E8Q6IFG1 317 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 CHSY3Q70JA7 882 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 KCT2Q8NC54 265 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ZCCHC10Q8TBK6 192 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 NT5CQ8TCD5 201 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 SERPINI1Q99574 410 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 CTRCQ99895 268 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 CENPKQ9BS16 269 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 MS4A8Q9BY19 250 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ACPTQ9BZG2 426 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 KLHL31Q9H511 634 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 BRF2Q9HAW0 419 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 RUVBL1Q9Y265 456 aaKnown RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ATP6AP2A0A1C7CYW4 349 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 LRIT2A6NDA9 550 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 TRPC5OSA6NMA1 111 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 POLR1CO15160 346 aaPredicted RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ZSCAN9O15535 394 aaPredicted RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 RGS14O43566 566 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ATP6AP2O75787 350 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 TBX6O95947 436 aaPredicted RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 JMJD7P0C870 316 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 HSD3B1P14060 373 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ITIH1P19827 911 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 HSD3B2P26439 372 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 MAPK10P53779 464 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 STXBP1P61764 594 aaKnown RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 MC2RQ01718 297 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 HYAL2Q12891 473 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 GRM7Q14831 915 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 NR6A1Q15406 480 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 PRTGQ2VWP7 1150 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 DEPDC1Q5TB30 811 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 TRIM46Q7Z4K8 759 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 PPP1R3BQ86XI6 285 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 GALNT15Q8N3T1 639 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 CPSF7Q8N684 471 aaKnown RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 BMPERQ8N8U9 685 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 TTC29Q8NA56 475 aaPredicted RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ZFAND2BQ8WV99 257 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 RNF31Q96EP0 1072 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 C3orf30Q96M34 536 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 ZNF285Q96NJ3 590 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 CCT7Q99832 543 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 EBF4Q9BQW3 602 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 SLC6A16Q9GZN6 736 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 REXO4Q9GZR2 422 aaKnown RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 S100A14Q9HCY8 104 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 APMAPQ9HDC9 416 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 RIC8BQ9NVN3 520 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 SLC39A1Q9NY26 324 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 VPS29Q9UBQ0 182 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 PISDQ9UG56 409 aa13.74□□□□□ -0.21
LINC00339-208ENST00000634934 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.74□□□□□ -0.21
LINC00339-208ENST00000634934 GOLGA8QA0A0J9YX86 632 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 SERTM1A2A2V5 107 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 HYKKA2RU49 373 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 DPPA5A6NC42 116 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 GOLGA8OA6NCC3 632 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 URADA6NGE7 173 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 B4E171 279 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 GOLGA8NF8WBI6 632 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 PLD2O14939 933 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 ERI3O43414 337 aaKnown RBP13.73□□□□□ -0.21
LINC00339-208ENST00000634934 ZNF888P0CJ79 500 aaPredicted RBP13.73□□□□□ -0.21
LINC00339-208ENST00000634934 PAX7P23759 505 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 TSPAN7P41732 249 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 PLA2G16P53816 162 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 RAB8AP61006 207 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 EIF3IQ13347 325 aaKnown RBP13.73□□□□□ -0.21
LINC00339-208ENST00000634934 IL11RAQ14626 422 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 TMEM35AQ53FP2 167 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 C3orf38Q5JPI3 329 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 MANEAQ5SRI9 462 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 PRAMEF17Q5VTA0 474 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 RNF165Q6ZSG1 346 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 Q6ZSR9 355 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 MAVSQ7Z434 540 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 OR2T11Q8NH01 316 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 OR8K5Q8NH50 307 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 WDR36Q8NI36 951 aaKnown RBP13.73□□□□□ -0.21
LINC00339-208ENST00000634934 TUBGCP3Q96CW5 907 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 MS4A6EQ96DS6 147 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 BTBD9Q96Q07 612 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 THTPAQ9BU02 230 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
LINC00339-208ENST00000634934 SLC7A5P2Q9GIP4 190 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 AICDAQ9GZX7 198 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms