RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 NSDHLQ15738 373 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 TMEM35AQ53FP2 167 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 AGAP7PQ5VUJ5 663 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 ABHD17CQ6PCB6 329 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 PRICKLE2Q7Z3G6 844 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 MYLK4Q86YV6 388 aaPredicted RBP15.78■□□□□ 0.12
UBE3D-208ENST00000626828 SHISA5Q8N114 240 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 L3MBTL4Q8NA19 623 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 MZB1Q8WU39 189 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 TM9SF4Q92544 642 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 CMTM7Q96FZ5 175 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 THOC3Q96J01 351 aaKnown RBP15.78■□□□□ 0.12
UBE3D-208ENST00000626828 AGAP4Q96P64 663 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 QRFPRQ96P65 431 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 MESP1Q9BRJ9 268 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 TBCDQ9BTW9 1192 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 TUBB6Q9BUF5 446 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 NTMT1Q9BV86 223 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 NOL11Q9H8H0 719 aaKnown RBP15.78■□□□□ 0.12
UBE3D-208ENST00000626828 LANCL2Q9NS86 450 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 PSD3Q9NYI0 1048 aa15.78■□□□□ 0.12
UBE3D-208ENST00000626828 HELZ2Q9BYK8 2649 aaKnown RBP15.77■□□□□ 0.12
UBE3D-208ENST00000626828 OR2W5A6NFC9 320 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 H0YIV9 168 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 GOLGA8RI6L899 631 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 PRMT3O60678 531 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 B4GALT2O60909 372 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 TGFB1P01137 390 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 SERPINA7P05543 415 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 SBK3P0C264 359 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 KRT15P19012 456 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 PTX3P26022 381 aaPredicted RBP15.77■□□□□ 0.12
UBE3D-208ENST00000626828 CCNG1P51959 295 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 EFNA3P52797 238 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 MTTPP55157 894 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 RHAGQ02094 409 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 EEF1A2Q05639 463 aaKnown RBP15.77■□□□□ 0.12
UBE3D-208ENST00000626828 ACTN3Q08043 901 aaPredicted RBP15.77■□□□□ 0.12
UBE3D-208ENST00000626828 Q0VFX4 171 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 RUNX2Q13950 521 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 RCN2Q14257 317 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 PCOLCEQ15113 449 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 DEPDC1Q5TB30 811 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 ADNP2Q6IQ32 1131 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 EMBQ6PCB8 327 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 IGFL3Q6UXB1 125 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 RIPOR1Q6ZS17 1223 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 ANKRD37Q7Z713 158 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 CA13Q8N1Q1 262 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 IMMP1LQ96LU5 166 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 PTCHD1Q96NR3 888 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 KCNC2Q96PR1 638 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 LMF1Q96S06 567 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 SERINC2Q96SA4 455 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 MS4A8Q9BY19 250 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 PRDM7Q9NQW5 492 aa15.77■□□□□ 0.12
UBE3D-208ENST00000626828 A0A0G2JN53 185 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 A0A1W2PPM1 405 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 C4orf51C9J302 202 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 CDH16O75309 829 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 CDC123O75794 336 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-208ENST00000626828 PLA2G2AP14555 144 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 SLCO1A2P46721 670 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 CCT5P48643 541 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 PHEXP78562 749 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 ABRAXAS2Q15018 415 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 CPSF6Q16630 551 aaKnown RBP eCLIP15.76■□□□□ 0.11
UBE3D-208ENST00000626828 AP5B1Q2VPB7 878 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 JMJD6Q6NYC1 403 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-208ENST00000626828 MILR1Q7Z6M3 343 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 ZADH2Q8N4Q0 377 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 ARMC2Q8NEN0 867 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 HUS1BQ8NHY5 278 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 RGMAQ96B86 450 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 MAGEB10Q96LZ2 347 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-208ENST00000626828 CENPKQ9BS16 269 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 C1QTNF3Q9BXJ4 246 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 COPS7BQ9H9Q2 264 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-208ENST00000626828 PCTPQ9UKL6 214 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 RNF11Q9Y3C5 154 aa15.76■□□□□ 0.11
UBE3D-208ENST00000626828 TLDC2A0PJX2 215 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 A8MT66 165 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 FAM227AF5H4B4 570 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 CLDN4O14493 209 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 OR7A17O14581 309 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 TUBBP07437 444 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 PRR35P0CG20 571 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 ATP5F1P24539 256 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 ARL1P40616 181 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 ARFIP1P53367 373 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 RAB38P57729 211 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 OR4D2P58180 307 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 DDX39BQ13838 428 aaKnown RBP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 ERCC6LQ2NKX8 1250 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 KHDRBS2Q5VWX1 349 aaKnown RBP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 ISLR2Q6UXK2 745 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 QSOX2Q6ZRP7 698 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 LANCL3Q6ZV70 420 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 SH2D5Q6ZV89 423 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 UBE3DQ7Z6J8 389 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms