RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 KCNN3Q9UGI6 736 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 OR51F1A6NGY5 319 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 C1QTNF3-AMACRE9PGA6 284 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 SEPT4O43236 478 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 GMDSO60547 372 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 TOXO94900 526 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ARHGEF15O94989 841 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 GLUD1P00367 558 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 GJB1P08034 283 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 HLA-EP13747 358 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 STC1P52823 247 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 BCL2L15Q5TBC7 163 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 PGAP1Q75T13 922 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 FZD8Q9H461 694 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 UNKLQ9H9P5 680 aaKnown RBP8.61□□□□□ -1.03
VCL-206ENST00000623461 MED31Q9Y3C7 131 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 MSCO60682 206 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 RHCEP18577 417 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 DDX6P26196 483 aaKnown RBP eCLIP8.61□□□□□ -1.034e-7■□□□□ 9.5
VCL-206ENST00000623461 ADCYAP1R1P41586 468 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 NDUFV1P49821 464 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ACTC1P68032 377 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ACTA1P68133 377 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 GINS1Q14691 196 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 EXOC3L2Q2M3D2 409 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 BEST3Q8N1M1 668 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 METTL4Q8N3J2 472 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 SLC35F5Q8WV83 523 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 NMUR1Q9HB89 426 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 TMEM5Q9Y2B1 443 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 PHRF1Q9P1Y6 1649 aaKnown RBP8.61□□□□□ -1.03
VCL-206ENST00000623461 TLL1O43897 1013 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 SOX14O95416 240 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 CD1DP15813 335 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 CELP19835 753 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 KELP23276 732 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ADH6P28332 368 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 HSD17B2P37059 387 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ZNF691Q5VV52 312 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 PHYKPLQ8IUZ5 450 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 OR13F1Q8NGS4 319 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ADAMTS19Q8TE59 1207 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 CNOT9Q92600 299 aaKnown RBP8.61□□□□□ -1.03
VCL-206ENST00000623461 MTERF1Q99551 399 aaKnown RBP8.61□□□□□ -1.03
VCL-206ENST00000623461 COQ3Q9NZJ6 369 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 WRAP73Q9P2S5 460 aaPredicted RBP8.61□□□□□ -1.03
VCL-206ENST00000623461 C14orf166Q9Y224 244 aaKnown RBP8.61□□□□□ -1.03
VCL-206ENST00000623461 IRS2Q9Y4H2 1338 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 UBR2Q8IWV8 1755 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ELOA3DA6NLF2 546 aaPredicted RBP8.61□□□□□ -1.03
VCL-206ENST00000623461 GRM6O15303 877 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 VAMP1P23763 118 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 RGS19P49795 217 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 TRAM2Q15035 370 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 POU4F3Q15319 338 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 USP41Q3LFD5 358 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ELOA3BQ3SY89 546 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 MPP7Q5T2T1 576 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 ELOA3Q8NG57 546 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 TTLQ8NG68 377 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 SORT1Q99523 831 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 PBDC1Q9BVG4 233 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 GTF2IRD1Q9UHL9 959 aa8.61□□□□□ -1.03
VCL-206ENST00000623461 FARSAQ9Y285 508 aaKnown RBP8.61□□□□□ -1.03
VCL-206ENST00000623461 F8W036 122 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 JUNBP17275 347 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 WEE1P30291 646 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 CPOXP36551 454 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 S100A10P60903 97 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 ARF3P61204 181 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 BLOC1S1P78537 153 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 ARF1P84077 181 aaKnown RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 ENPP6Q6UWR7 440 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 CEACAM20Q6UY09 585 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 CREB3L2Q70SY1 520 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 BEST4Q8NFU0 473 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 OR10Q1Q8NGQ4 319 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 PPTC7Q8NI37 304 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 GPR151Q8TDV0 419 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 NKD1Q969G9 470 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 CD180Q99467 661 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 POTEKPQ9BYX7 375 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 BRINP2Q9C0B6 783 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 PDGFDQ9GZP0 370 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 SMIM30A4D0T7 59 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 NARSO43776 548 aaKnown RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 TRAPPC2P0DI81 140 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 TRAPPC2BP0DI82 140 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 CERS1P27544 350 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 MPIP34949 423 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 STXBP1P61764 594 aaKnown RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 EMX1Q04741 257 aaPredicted RBP8.6□□□□□ -1.03
VCL-206ENST00000623461 RCAN2Q14206 197 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 SLC10A6Q3KNW5 377 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 SLC27A4Q6P1M0 643 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 LRRC15Q8TF66 581 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 PCED1BQ96HM7 432 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 B3GNT4Q9C0J1 378 aa8.6□□□□□ -1.03
VCL-206ENST00000623461 NIPAL2Q9H841 368 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms