RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 PAAF1Q9BRP4 392 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 HOXD1Q9GZZ0 328 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 CWH43Q9H720 699 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 DKK3Q9UBP4 350 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 BTNL2Q9UIR0 455 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 KLHL21Q9UJP4 597 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 GPR34Q9UPC5 381 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ERVK-11Q9UQG0 969 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 N6AMT1Q9Y5N5 214 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ST14Q9Y5Y6 855 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 CYB5AP00167 134 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 GAS6Q14393 721 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 VMACQ2NL98 169 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 LRIF1Q5T3J3 769 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PRPF38BQ5VTL8 546 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 TCEAL6Q6IPX3 200 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ZSWIM9Q86XI8 627 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PLA2G15Q8NCC3 412 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 SCGB3A2Q96PL1 93 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 EPHA6Q9UF33 1036 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ZNF222Q9UK12 451 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ADAMTS4O75173 837 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ACSL1P33121 698 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 SRP54P61011 504 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 WDR5P61964 334 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 E2F2Q14209 437 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 NFE2L1Q14494 772 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 CNPY1Q3B7I2 92 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PERM1Q5SV97 790 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 BAIAP2L2Q6UXY1 529 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 LRRTM3Q86VH5 581 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 RASGRP3Q8IV61 690 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 CLDN19Q8N6F1 224 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PSD4Q8NDX1 1056 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 TMEM234Q8WY98 164 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 SMG9Q9H0W8 520 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 NFKBIL1Q9UBC1 381 aaPredicted RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 STOML2Q9UJZ1 356 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 KCNK6Q9Y257 313 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ZNF726A6NNF4 738 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 G3V2L1 256 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 CD72P21854 359 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PREPP48147 710 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ACTC1P68032 377 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ACTA1P68133 377 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 MGAT3Q09327 533 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 LRP8Q14114 963 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 OR4D1Q15615 310 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 KCTD19Q17RG1 926 aaPredicted RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 CTC1Q2NKJ3 1217 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 RNF220Q5VTB9 566 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 GPR153Q6NV75 609 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 SATL1Q86VE3 508 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 RNF130Q86XS8 419 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 OR4C15Q8NGM1 316 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 FUBP1Q96AE4 644 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 GPER1Q99527 375 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PRTFDC1Q9NRG1 225 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 COL24A1Q17RW2 1714 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 STRCQ7RTU9 1775 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 DUX1O43812 170 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ORC5O43913 435 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 HLA-DPB1P04440 258 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 RHCEP18577 417 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 NELFEP18615 380 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 GGT1P19440 569 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 AGTR2P50052 363 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 DMPKQ09013 629 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ELOAQ14241 798 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 GANABQ14697 944 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 CLCA4Q14CN2 919 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 UBAP2Q5T6F2 1119 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PRR23CQ6ZRP0 262 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 AMIGO1Q86WK6 493 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 APCDD1Q8J025 514 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 LRRC25Q8N386 305 aaPredicted RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 AQP11Q8NBQ7 271 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 BMFQ96LC9 184 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 KCNA7Q96RP8 456 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 C17orf62Q9BQA9 187 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ELL3Q9HB65 397 aaPredicted RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PREBQ9HCU5 417 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 ZNF221Q9UK13 617 aa8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PPIEQ9UNP9 301 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 MRPS7Q9Y2R9 242 aaKnown RBP8.55□□□□□ -1.04
AP000542.3-201ENST00000623391 PSIP1O75475 530 aaKnown RBP8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 BCKDHAP12694 445 aa8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 F8A1P23610 371 aa8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 SLC6A4P31645 630 aa8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 CSTF2P33240 577 aaKnown RBP eCLIP8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 GDF5P43026 501 aa8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 GPR143P51810 404 aa8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 TCTE1Q5JU00 501 aa8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 MEIOBQ8N635 442 aa8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 ZNF559Q9BR84 538 aa8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 POLR2J2Q9GZM3 115 aaKnown RBP8.54□□□□□ -1.04
AP000542.3-201ENST00000623391 OR51B5Q9H339 312 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms