RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ELP4Q96EB1 424 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 KIF12Q96FN5 646 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 LRRC46Q96FV0 321 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 OTUB1Q96FW1 271 aaPredicted RBP7.63□□□□□ -1.19
VPS11-209ENST00000622309 CXorf58Q96LI9 332 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 TAAR1Q96RJ0 339 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 CYP2S1Q96SQ9 504 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 ABCC13Q9NSE7 274 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 PADI2Q9Y2J8 665 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 KCNK7Q9Y2U2 307 aa7.63□□□□□ -1.19
VPS11-209ENST00000622309 TCRBV16S1A1N1A0A5B0 115 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 FAM234BA2RU67 622 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PMS2P1A4D2B8 440 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 VIPP01282 170 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PTPRAP18433 802 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PTAFRP25105 342 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PSMA1P25786 263 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 APEX1P27695 318 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 BMP8BP34820 402 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 GMPSP49915 693 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 CSRP3P50461 194 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 DCDC1P59894 354 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 SH3BP2P78314 561 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 CRYZQ08257 329 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 PRKG2Q13237 762 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 SF3A2Q15428 464 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 UGCGQ16739 394 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 AP5B1Q2VPB7 878 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 BCL2L15Q5TBC7 163 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PKN3Q6P5Z2 889 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 C3P1Q6ZMU1 363 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 NLRC3Q7RTR2 1065 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 GPR155Q7Z3F1 870 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 BMP8AQ7Z5Y6 402 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 KIAA0907Q7Z7F0 614 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 PAQR7Q86WK9 346 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZDHHC21Q8IVQ6 265 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 DENND6AQ8IWF6 608 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 FAM217AQ8IXS0 508 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZNF567Q8N184 647 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 NETO2Q8NC67 525 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 OR52K2Q8NGK3 314 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 OR2T4Q8NH00 348 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 C9orf43Q8TAL5 461 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 APH1BQ8WW43 257 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 KCTD13Q8WZ19 329 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 RHBDF1Q96CC6 855 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZNF419Q96HQ0 510 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 DNTTIP1Q9H147 329 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 NT5DC2Q9H857 520 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ANKRA2Q9H9E1 313 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ADARB2Q9NS39 739 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 MPP6Q9NZW5 540 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 GABRQQ9UN88 632 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 COL1A2P08123 1366 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 C2orf74A8MZ97 194 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 TEX46H3BTG2 121 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 EIF3GO75821 320 aaKnown RBP eCLIP7.62□□□□□ -1.19
VPS11-209ENST00000622309 ATG12O94817 140 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 AP2A2O94973 939 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 HK1P19367 917 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ARL4AP40617 200 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PIK3CGP48736 1102 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 MAZP56270 477 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 NPRL3Q12980 569 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZNF648Q5T619 568 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 MANEALQ5VSG8 457 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 GPR153Q6NV75 609 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PSRC1Q6PGN9 363 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 BSNDQ8WZ55 320 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 OTULINQ96BN8 352 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ATG4CQ96DT6 458 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 SCRN2Q96FV2 425 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZNF583Q96ND8 569 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PTDSS2Q9BVG9 487 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PAPOLGQ9BWT3 736 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 DEFB129Q9H1M3 183 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 MAGIXQ9H6Y5 334 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 PRMT8Q9NR22 394 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 MIOXQ9UGB7 285 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 FEM1BQ9UK73 627 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ATXN7L1Q9ULK2 861 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 DUSP12Q9UNI6 340 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 OR6C74A6NCV1 312 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 SLC9B1P1A6NJY1 282 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 MPTX1A8MV57 137 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 WASH4PA8MWX3 477 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 AIPO00170 330 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 FPGTO14772 594 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 DCLK1O15075 740 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 MDM4O15151 490 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 ZBTB24O43167 697 aaPredicted RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 AKAP8O43823 692 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 PIAS2O75928 621 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 CDRT1O95170 752 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 AP2A1O95782 977 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 IDH2P48735 452 aaKnown RBP7.62□□□□□ -1.19
VPS11-209ENST00000622309 CLCN3P51790 818 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 BTG1P62324 171 aa7.62□□□□□ -1.19
VPS11-209ENST00000622309 HNRNPA0Q13151 305 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 346.2 ms