RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 C1orf186Q6ZWK4 172 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 BATF2Q8N1L9 274 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 TRPV3Q8NET8 790 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 OR5T2Q8NGG2 359 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 OR52E1Q8NGJ3 308 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 OR13C5Q8NGS8 318 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 KIAA1524Q8TCG1 905 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 SMAP2Q8WU79 429 aaPredicted RBP4.28□□□□□ -1.72
CPNE3-213ENST00000622183 ARHGAP45Q92619 1136 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 SLC35C1Q96A29 364 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 ZNF501Q96CX3 271 aaPredicted RBP4.28□□□□□ -1.72
CPNE3-213ENST00000622183 OMA1Q96E52 524 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 F2RL3Q96RI0 385 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 PKP2Q99959 881 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 NUSAP1Q9BXS6 441 aaKnown RBP4.28□□□□□ -1.72
CPNE3-213ENST00000622183 CARD9Q9H257 536 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 PIGVQ9NUD9 493 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 DBF4Q9UBU7 674 aaPredicted RBP4.28□□□□□ -1.72
CPNE3-213ENST00000622183 PILRAQ9UKJ1 303 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 PROCRQ9UNN8 238 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 ERVK-19Q9WJR5 959 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 SH3GLB1Q9Y371 365 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 KIAA1210Q9ULL0 1709 aa4.28□□□□□ -1.72
CPNE3-213ENST00000622183 NEDD4P46934 1319 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 ATP6AP2A0A1C7CYW4 349 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 A0A1W2PR80 420 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 IFITM10A6NMD0 228 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 C19orf81C9J6K1 198 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 ZNF195O14628 629 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 PRPSAP2O60256 369 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 HSF2BPO75031 334 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 SLC4A1P02730 911 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 SKILP12757 684 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 AREGP15514 252 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 PTMSP20962 102 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 ACKR3P25106 362 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 MAPK3P27361 379 aaPredicted RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 GJB2P29033 226 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 CCR4P51679 360 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 CNN1P51911 297 aaKnown RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 GNB1P62873 340 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 GABPAQ06546 454 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 MSLNQ13421 630 aaPredicted RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 HNRNPDQ14103 355 aaKnown RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 GAMTQ14353 236 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 TOR1AIP1Q5JTV8 583 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 RUSC1-AS1Q66K80 236 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 NEK5Q6P3R8 708 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 GET4Q7L5D6 327 aaPredicted RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 PTAR1Q7Z6K3 402 aaPredicted RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 HOGA1Q86XE5 327 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 SLC43A2Q8N370 569 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 OR4A16Q8NH70 328 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 MAPK15Q8TD08 544 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 GANCQ8TET4 914 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 CHURC1Q8WUH1 139 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 RUNDC3BQ96NL0 473 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 NTMT1Q9BV86 223 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 XPO4Q9C0E2 1151 aaKnown RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 C1orf21Q9H246 121 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 INTS10Q9NVR2 710 aaKnown RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 TEKT2Q9UIF3 430 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 EXOC7Q9UPT5 735 aa4.27□□□□□ -1.73
CPNE3-213ENST00000622183 PIN4Q9Y237 131 aaKnown RBP4.27□□□□□ -1.73
CPNE3-213ENST00000622183 UMODL1Q5DID0 1318 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 RNF123Q5XPI4 1314 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 hCG_38984A0A1B0GV85 526 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 C15orf61A6NNL5 157 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 SRRM4A7MD48 611 aaKnown RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 HHLA1C9JL84 531 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 SURF4O15260 269 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 P2RX6O15547 441 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 ATP6V1G1O75348 118 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 CEACAM4O75871 244 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 EPOP01588 193 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 GSTA2P09210 222 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 ZNF18P17022 549 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 HLA-FP30511 346 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 HNRNPFP52597 415 aaKnown RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 KCNK10P57789 538 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 SRP54P61011 504 aaKnown RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 PPP1R8Q12972 351 aaKnown RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 SPHARQ15513 63 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 SPANXN4Q5MJ08 99 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 LYPLAL1Q5VWZ2 237 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 ARHGAP17Q68EM7 881 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 SNRNP48Q6IEG0 339 aaKnown RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 FIP1L1Q6UN15 594 aaKnown RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 DLEU7Q6UYE1 221 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 RFPL4BQ6ZWI9 263 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 NLRP14Q86W24 1093 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 ELMOD1Q8N336 334 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 TMEM185AQ8NFB2 350 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 OR6S1Q8NH40 331 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 FAM76AQ8TAV0 307 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 UBTD2Q8WUN7 234 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 PRCCQ92733 491 aaPredicted RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 TMEM186Q96B77 213 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 ZNF486Q96H40 463 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms