RNA–Protein interactions for RNA: ENST00000622107.4

LTBP4-237, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-237ENST00000622107 PEX11GQ96HA9 241 aa14.09□□□□□ -0.15
LTBP4-237ENST00000622107 IQCGQ9H095 443 aaKnown RBP14.09□□□□□ -0.15
LTBP4-237ENST00000622107 IPPKQ9H8X2 491 aa14.09□□□□□ -0.15
LTBP4-237ENST00000622107 RIC8BQ9NVN3 520 aa14.09□□□□□ -0.15
LTBP4-237ENST00000622107 ZNF358Q9NW07 568 aa14.09□□□□□ -0.15
LTBP4-237ENST00000622107 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.09□□□□□ -0.15
LTBP4-237ENST00000622107 MRPS33Q9Y291 106 aaKnown RBP14.09□□□□□ -0.15
LTBP4-237ENST00000622107 V9GYY5 206 aaPredicted RBP14.09□□□□□ -0.15
LTBP4-237ENST00000622107 CCDC88CQ9P219 2028 aa14.08□□□□□ -0.15
LTBP4-237ENST00000622107 TLDC2A0PJX2 215 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 ZNF860A6NHJ4 632 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 PYGBP11216 843 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 RNH1P13489 461 aaKnown RBP14.08□□□□□ -0.16
LTBP4-237ENST00000622107 GCAP28676 217 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 HSD17B3P37058 310 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 BTN3A2P78410 334 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 DDX39BQ13838 428 aaKnown RBP14.08□□□□□ -0.16
LTBP4-237ENST00000622107 INPP5JQ15735 1006 aaPredicted RBP14.08□□□□□ -0.16
LTBP4-237ENST00000622107 TMEM35AQ53FP2 167 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 PRR30Q53SZ7 412 aaPredicted RBP14.08□□□□□ -0.16
LTBP4-237ENST00000622107 NDUFAF7Q7L592 441 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 GOLGA7Q7Z5G4 137 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 TDRPQ86YL5 185 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 IQCKQ8N0W5 287 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 ZADH2Q8N4Q0 377 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 AFAP1L2Q8N4X5 818 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 CCDC63Q8NA47 563 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 OR2L5Q8NG80 312 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 TBC1D20Q96BZ9 403 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 CCDC126Q96EE4 140 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 CMTM7Q96FZ5 175 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 NPLQ9BXD5 320 aaPredicted RBP14.08□□□□□ -0.16
LTBP4-237ENST00000622107 LHPPQ9H008 270 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 ILKAPQ9H0C8 392 aaPredicted RBP14.08□□□□□ -0.16
LTBP4-237ENST00000622107 RHBGQ9H310 441 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 MID2Q9UJV3 735 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 B3GNT3Q9Y2A9 372 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 STK38LQ9Y2H1 464 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 MAST4O15021 2626 aa14.08□□□□□ -0.16
LTBP4-237ENST00000622107 LRIT2A6NDA9 550 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 E2F3O00716 465 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 CLDN4O14493 209 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 CHST10O43529 356 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 WFS1O76024 890 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 SIX3O95343 332 aaPredicted RBP14.07□□□□□ -0.16
LTBP4-237ENST00000622107 CLDN9O95484 217 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 OTCP00480 354 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 SHBGP04278 402 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 FHP07954 510 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 PLA2G16P53816 162 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 MTTPP55157 894 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 EEF1A2Q05639 463 aaKnown RBP14.07□□□□□ -0.16
LTBP4-237ENST00000622107 ACTN3Q08043 901 aaPredicted RBP14.07□□□□□ -0.16
LTBP4-237ENST00000622107 PCDH1Q08174 1060 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 UBAP2LQ14157 1087 aaKnown RBP14.07□□□□□ -0.16
LTBP4-237ENST00000622107 RASA2Q15283 850 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 AP5B1Q2VPB7 878 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 AGAP7PQ5VUJ5 663 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 LAPTM4BQ86VI4 370 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 KBTBD2Q8IY47 623 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 LAS2Q8IYD9 372 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 C8orf44Q96CB5 159 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 MS4A6EQ96DS6 147 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 AGAP4Q96P64 663 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 KCNC2Q96PR1 638 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 SERINC2Q96SA4 455 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 RBCK1Q9BYM8 510 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 SLC29A3Q9BZD2 475 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 NOL11Q9H8H0 719 aaKnown RBP14.07□□□□□ -0.16
LTBP4-237ENST00000622107 ZNF160Q9HCG1 818 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 MAP10Q9P2G4 905 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 ASB1Q9Y576 335 aa14.07□□□□□ -0.16
LTBP4-237ENST00000622107 SPTAN1Q13813 2472 aaKnown RBP14.07□□□□□ -0.16
LTBP4-237ENST00000622107 USP9YO00507 2555 aaPredicted RBP14.07□□□□□ -0.16
LTBP4-237ENST00000622107 SYNDIG1LA6NDD5 238 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 CDC123O75794 336 aaPredicted RBP14.06□□□□□ -0.16
LTBP4-237ENST00000622107 ATP5F1P24539 256 aaPredicted RBP14.06□□□□□ -0.16
LTBP4-237ENST00000622107 PIK3CBP42338 1070 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 UQCRFS1P47985 274 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 OLR1P78380 273 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 IFT88Q13099 833 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 NSDHLQ15738 373 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 CPSF6Q16630 551 aaKnown RBP eCLIP14.06□□□□□ -0.16
LTBP4-237ENST00000622107 ERCC6LQ2NKX8 1250 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 CCDC153Q494R4 210 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 C10orf62Q5T681 223 aaPredicted RBP14.06□□□□□ -0.16
LTBP4-237ENST00000622107 MILR1Q7Z6M3 343 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 PDSS2Q86YH6 399 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 PARP9Q8IXQ6 854 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 FAM26EQ8N5C1 309 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 OR7G3Q8NG95 312 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 EPS8L3Q8TE67 593 aaKnown RBP14.06□□□□□ -0.16
LTBP4-237ENST00000622107 CAVIN3Q969G5 261 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 THOC3Q96J01 351 aaKnown RBP14.06□□□□□ -0.16
LTBP4-237ENST00000622107 WDR77Q9BQA1 342 aaPredicted RBP14.06□□□□□ -0.16
LTBP4-237ENST00000622107 MESP1Q9BRJ9 268 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 TBCDQ9BTW9 1192 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 TUBB6Q9BUF5 446 aa14.06□□□□□ -0.16
LTBP4-237ENST00000622107 VN1R1Q9GZP7 353 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms