RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PAIP2Q9BPZ3 127 aaKnown RBP17.59■□□□□ 0.41
CIRBP-245ENST00000621399 CENPKQ9BS16 269 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 TRMOQ9BU70 441 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 SLC29A3Q9BZD2 475 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 SHCBP1LQ9BZQ2 653 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 SOX17Q9H6I2 414 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-245ENST00000621399 PSD3Q9NYI0 1048 aa17.59■□□□□ 0.41
CIRBP-245ENST00000621399 IGLV3-12A0A075B6K2 115 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 VSTM2BA6NLU5 285 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 H3BQF6 201 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 BIRC5O15392 142 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 CRCPO75575 148 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 SASH3O75995 380 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 RECKO95980 971 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 KRT6AP02538 564 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 KRT6BP04259 564 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 ZGLP1P0C6A0 271 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 KRT6CP48668 564 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 RAP1GDS1P52306 607 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 OLR1P78380 273 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 COL28A1Q2UY09 1125 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 HHATQ5VTY9 493 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 ZCCHC23Q6ZST2 131 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 SELENOMQ8WWX9 145 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 RGMAQ96B86 450 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 CRELD1Q96HD1 420 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 SPSB2Q99619 263 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 SH3GL2Q99962 352 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 TBCDQ9BTW9 1192 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 ROGDIQ9GZN7 287 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 COPS7BQ9H9Q2 264 aaPredicted RBP17.58■□□□□ 0.4
CIRBP-245ENST00000621399 CLK4Q9HAZ1 481 aaKnown RBP17.58■□□□□ 0.4
CIRBP-245ENST00000621399 MLXIPLQ9NP71 852 aa17.58■□□□□ 0.4
CIRBP-245ENST00000621399 FARSBQ9NSD9 589 aaKnown RBP17.58■□□□□ 0.4
CIRBP-245ENST00000621399 PKD1L2Q7Z442 2459 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 CDC14CA4D256 554 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 MANBAO00462 879 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 CHST10O43529 356 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 B3GALT2O43825 422 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 NPHS1O60500 1241 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 DNAJB6O75190 326 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 ULK1O75385 1050 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 PDYNP01213 254 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 DHRS4L1P0CG22 281 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 NEFHP12036 1026 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 XCR1P46094 333 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 MTTPP55157 894 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 KLC1Q07866 573 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 CDC20Q12834 499 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 CUL3Q13618 768 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 IL10RAQ13651 578 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 AP5B1Q2VPB7 878 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 CRTC2Q53ET0 693 aaPredicted RBP17.57■□□□□ 0.4
CIRBP-245ENST00000621399 TCHHL1Q5QJ38 904 aaPredicted RBP17.57■□□□□ 0.4
CIRBP-245ENST00000621399 ATP1A1-AS1Q5TC04 95 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 FAM219BQ5XKK7 198 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 UBE3DQ7Z6J8 389 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 ZC3H7AQ8IWR0 971 aaKnown RBP17.57■□□□□ 0.4
CIRBP-245ENST00000621399 MGARPQ8TDB4 240 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 PEX11GQ96HA9 241 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 QRFPRQ96P65 431 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 KCNA7Q96RP8 456 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 SERINC2Q96SA4 455 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 SERPINI1Q99574 410 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 TGIF2Q9GZN2 237 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 ACBD3Q9H3P7 528 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 EML4Q9HC35 981 aaKnown RBP17.57■□□□□ 0.4
CIRBP-245ENST00000621399 PRDM7Q9NQW5 492 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 C14orf105Q9NVL8 296 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 NKIRAS1Q9NYS0 192 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 TIMM22Q9Y584 194 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 SEC16AO15027 2179 aa17.57■□□□□ 0.4
CIRBP-245ENST00000621399 RTCAO00442 366 aaKnown RBP17.56■□□□□ 0.4
CIRBP-245ENST00000621399 BMP10O95393 424 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 ETHE1O95571 254 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 UMODP07911 640 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 IL10P22301 178 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 OTX2P32243 289 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 SERPINB5P36952 375 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 SSR2P43308 183 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 SLC18A1P54219 525 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 RCN2Q14257 317 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 SSPNQ14714 243 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 UGT8Q16880 541 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 TTMPQ5BVD1 217 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 ARL13AQ5H913 290 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-245ENST00000621399 OR4C11Q6IEV9 310 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 CUZD1Q86UP6 607 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 TMEM151BQ8IW70 566 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 SHISA5Q8N114 240 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 SNRNP27Q8WVK2 155 aaKnown RBP17.56■□□□□ 0.4
CIRBP-245ENST00000621399 CRB3Q9BUF7 120 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 NPLQ9BXD5 320 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-245ENST00000621399 PRORYQ9H606 182 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 ZNF446Q9NWS9 450 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 RALYQ9UKM9 306 aaKnown RBP17.56■□□□□ 0.4
CIRBP-245ENST00000621399 PPT2Q9UMR5 302 aa17.56■□□□□ 0.4
CIRBP-245ENST00000621399 PSMD12O00232 456 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-245ENST00000621399 JRKO75564 520 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 FURINP09958 794 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms