RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 XPR1Q9UBH6 696 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NKX1-2Q9UD57 310 aaPredicted RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PTBP2Q9UKA9 531 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 NXT1Q9UKK6 140 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RAB26Q9ULW5 256 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 RAP2CQ9Y3L5 183 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PCDHGA4Q9Y5G9 962 aa5.01□□□□□ -1.61
SHMT1-211ENST00000618902 PTPN13Q12923 2485 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 MED13Q9UHV7 2174 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 A0A088AWK7 358 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 A0A0J9YVX5 310 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 A0A1B0GTL3 188 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 ARHGAP10A1A4S6 786 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 FITM1A5D6W6 292 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 PABPN1LA6NDY0 278 aaKnown RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 TMEM150CB9EJG8 249 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 C9J4A7 227 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 E7EQ34 232 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 H7BY64 318 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 PPP6CO00743 305 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 HAT1O14929 419 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 P2RX6O15547 441 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 LCMT2O60294 686 aaKnown RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 DLX3O60479 287 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 SCRG1O75711 98 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 SIX3O95343 332 aaPredicted RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 STAMBPO95630 424 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 HSPA4LO95757 839 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 TBX6O95947 436 aaPredicted RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 PROCP04070 461 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 ENO1P06733 434 aaKnown RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 RBP1P09455 135 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CDH1P12830 882 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 UQCRBP14927 111 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 WT1P19544 449 aaPredicted RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 TCN2P20062 427 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CD22P20273 847 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 ITPKBP27987 946 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 GSTM2P28161 218 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 GGT5P36269 586 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CPOXP36551 454 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 BCL6P41182 706 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CCR10P46092 362 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 HSPA7P48741 367 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 HNMTP50135 292 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 IDH3AP50213 366 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 RRADP55042 308 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 MTTPP55157 894 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 FOXL2P58012 376 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 SKP1P63208 163 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CSNK1G2P78368 415 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 MEF2AQ02078 507 aaPredicted RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 FOXM1Q08050 763 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 TRAP1Q12931 704 aaKnown RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 ACAP2Q15057 778 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 TGIF1Q15583 401 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 FAM83EQ2M2I3 478 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CDKL4Q5MAI5 379 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CATSPEREQ5SY80 951 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 LIPMQ5VYY2 423 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 ADNP2Q6IQ32 1131 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 LCN10Q6JVE6 187 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 RHBDD2Q6NTF9 364 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 PWWP2BQ6NUJ5 590 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 PRMT9Q6P2P2 845 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 LCTLQ6UWM7 567 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 SLCO4C1Q6ZQN7 724 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 MED25Q71SY5 747 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 FKBP9P1Q75LS8 142 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 RNF44Q7L0R7 432 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 VN1R5Q7Z5H4 357 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 THOC6Q86W42 341 aaKnown RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 SLC22A9Q8IVM8 553 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 MCATQ8IVS2 390 aaKnown RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 ARHGEF39Q8N4T4 335 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 ZNF655Q8N720 491 aaPredicted RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 TMEM102Q8N9M5 508 aaPredicted RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 ICA1LQ8NDH6 482 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 ABHD11Q8NFV4 315 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 OR4K1Q8NGD4 311 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CEP70Q8NHQ1 597 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 RHEBL1Q8TAI7 183 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 TRPC4APQ8TEL6 797 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 TSPEARQ8WU66 669 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 UBTD2Q8WUN7 234 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 LZICQ8WZA0 190 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 SLC39A7Q92504 469 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 TTC9Q92623 222 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 NEIL2Q969S2 332 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 FKBP10Q96AY3 582 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 DGCR14Q96DF8 476 aaKnown RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 THAP11Q96EK4 314 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 PRAP1Q96NZ9 151 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 NSUN5Q96P11 429 aaKnown RBP5□□□□□ -1.61
SHMT1-211ENST00000618902 OR2A5Q96R48 311 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 CCT7Q99832 543 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 EGFL8Q99944 293 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 MACROD1Q9BQ69 325 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 ECSITQ9BQ95 431 aa5□□□□□ -1.61
SHMT1-211ENST00000618902 ARHGAP9Q9BRR9 750 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms