RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 KLHL26Q53HC5 615 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 PDE12Q6L8Q7 609 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 PNCKQ6P2M8 343 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TMPRSS11BQ86T26 416 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 MFSD2AQ8NA29 543 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 VANGL1Q8TAA9 524 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 LRRC46Q96FV0 321 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ZSWIM3Q96MP5 696 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 WRAP53Q9BUR4 548 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 TPT1P8Q9HAU6 139 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 AGPAT4Q9NRZ5 378 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 HPF1Q9NWY4 346 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 HMX2A2RU54 273 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 PIRO00625 290 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TBX1O43435 398 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 MMP20O60882 483 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 POP7O75817 140 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 ABCC6O95255 1503 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 IL7P13232 177 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 PRKACBP22694 351 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CD97P48960 835 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ZNF33BQ06732 778 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 LRRC32Q14392 662 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 VARS2Q5ST30 1063 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 MAMDC4Q6UXC1 1216 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TMEM17Q86X19 198 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CIR1Q86X95 450 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 KIF18BQ86Y91 864 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CAMKVQ8NCB2 501 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 EXOSC8Q96B26 276 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 MSANTD3Q96H12 275 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TTYH1Q9H313 450 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 SYNDIG1Q9H7V2 258 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CRTAC1Q9NQ79 661 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 EXOSC1Q9Y3B2 195 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 KCTD3Q9Y597 815 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 HEMK1Q9Y5R4 338 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 SPIN1Q9Y657 262 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 ATRNL1Q5VV63 1379 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 MROH6A6NGR9 719 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 GABBR2O75899 941 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 SLC35G4P0C7Q5 338 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 SMIM18P0DKX4 95 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 HOXD8P13378 290 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 RPL10P27635 214 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 CRHR2Q13324 411 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CRB2Q5IJ48 1285 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 MS4A13Q5J8X5 152 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 LRRC66Q68CR7 880 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 GDPD4Q6W3E5 623 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 NRSN1Q8IZ57 195 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 Q8N402 240 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 OR4F6Q8NGB9 312 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 FBXL20Q96IG2 436 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 MAELQ96JY0 434 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 TEPSINQ96N21 525 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 IL4I1Q96RQ9 567 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 PKP4Q99569 1192 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 EFCAB11Q9BUY7 163 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 FUNDC2Q9BWH2 189 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 DPAGT1Q9H3H5 408 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CPNE5Q9HCH3 593 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ABCD2Q9UBJ2 740 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 LIPT1Q9Y234 373 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 KNDC1Q76NI1 1749 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ZNF407Q9C0G0 2248 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 LAG3P18627 525 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 GGT1P19440 569 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 DAOAP59103 153 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CSTF1Q05048 431 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 NFATC3Q12968 1075 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 FAM110CQ1W6H9 321 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 SIRPB2Q5JXA9 342 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 MANEALQ5VSG8 457 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 TNFAIP8L2Q6P589 184 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 PRSS58Q8IYP2 241 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 OR6Q1Q8NGQ2 317 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ZC3H10Q96K80 434 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 SORT1Q99523 831 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 BARD1Q99728 777 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 BTBD1Q9H0C5 482 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 REEP4Q9H6H4 257 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ZNF639Q9UID6 485 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 STUB1Q9UNE7 303 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 NEDD8-MDP1E9PL57 170 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CCL22O00626 93 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CDRT1O95170 752 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 RENP00797 406 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 EIF2DP41214 584 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 GALNT1Q10472 559 aaPredicted RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 RCAN2Q14206 197 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 C2orf76Q3KRA6 126 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 ANKDD1AQ495B1 522 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CLEC20AQ6ZU45 233 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 PIM3Q86V86 326 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 RGL4Q8IZJ4 473 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 OVCA2Q8WZ82 227 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 CLIP3Q96DZ5 547 aa2.95□□□□□ -1.94
LPP-221ENST00000618621 PIWIL1Q96J94 861 aaKnown RBP2.95□□□□□ -1.94
LPP-221ENST00000618621 SUCNR1Q9BXA5 334 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms