RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MFSD7Q6UXD7 560 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ZNF534Q76KX8 674 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 TMEM132CQ8N3T6 1108 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ABHD11Q8NFV4 315 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 OR9A4Q8NGU2 314 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 OR14A16Q8NHC5 309 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 WDR83Q9BRX9 315 aaKnown RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 SGPP1Q9BX95 441 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 ANGPTL4Q9BY76 406 aa4.23□□□□□ -1.73
SNCA-213ENST00000618500 FRMD8P1Q9BZ68 369 aaPredicted RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 PITHD1Q9GZP4 211 aaPredicted RBP4.23□□□□□ -1.73
SNCA-213ENST00000618500 A0A087X0T9 212 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 A0A1W2PPR1 153 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 A8MVJ9 347 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 BUD23O43709 281 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 CDC40O60508 579 aaKnown RBP eCLIP4.22□□□□□ -1.73
SNCA-213ENST00000618500 TRIM3O75382 744 aaPredicted RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 ERN1O75460 977 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 ACTL6AO96019 429 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 FAM228BP0C875 321 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 ENO3P13929 434 aaPredicted RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 ADRA1DP25100 572 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 PSMB4P28070 264 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 GALNSP34059 522 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 BDKRB1P46663 353 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 COMPP49747 757 aaPredicted RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 MAT1AQ00266 395 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 PLGLB1Q02325 96 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 FILIP1LQ4L180 1135 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 ABHD13Q7L211 337 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 SLC26A11Q86WA9 606 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 PRSS58Q8IYP2 241 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 DEPDC4Q8N2C3 294 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 NAXEQ8NCW5 288 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 TNIP2Q8NFZ5 429 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 OR4L1Q8NH43 312 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 ASB15Q8WXK1 588 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 KRT35Q92764 455 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 TM9SF2Q99805 663 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 CXorf56Q9H5V9 222 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 EIF2B3Q9NR50 452 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 HPF1Q9NWY4 346 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 CTTNBP2NLQ9P2B4 639 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 PTBP2Q9UKA9 531 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 ZNF281Q9Y2X9 895 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 PRRC2CQ9Y520 2896 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 NIPBLQ6KC79 2804 aaeCLIP4.22□□□□□ -1.73
SNCA-213ENST00000618500 IGHV3-20A0A0C4DH32 117 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 TRBV11-1A0A0K0K1C0 115 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 LRRC3CA6NJW4 275 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 NPIPA2E9PIF3 369 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 NPIPA3F8WFD2 350 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 CST8O60676 142 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 AVILO75366 819 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 IL2RAP01589 272 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 ESR1P03372 595 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 CATP04040 527 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 SLC35G6P0C7Q6 338 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 RNH1P13489 461 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 OGNP20774 298 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 DIO3P55073 304 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 DSCR9P59020 149 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 IGLV3-21P80748 117 aaPredicted RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 NR1I3Q14994 352 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 ELAVL1Q15717 326 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 CASC4Q6P4E1 433 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 BRICD5Q6PL45 260 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 Q71RC1 249 aaPredicted RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 WDR53Q7Z5U6 358 aaPredicted RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 CAND1Q86VP6 1230 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 ZNF611Q8N823 705 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 OR5L2Q8NGL0 311 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 OR10Q1Q8NGQ4 319 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 WNT2BQ93097 391 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 RASL10BQ96S79 203 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 HAUS8Q9BT25 410 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 ESRP2Q9H6T0 727 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 BARX1Q9HBU1 254 aaPredicted RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 MYOTQ9UBF9 498 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 FAM8A1Q9UBU6 413 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 NDRG3Q9UGV2 375 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 CNOT11Q9UKZ1 510 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 MRPS18CQ9Y3D5 142 aaKnown RBP4.22□□□□□ -1.73
SNCA-213ENST00000618500 HEATR5BQ9P2D3 2071 aa4.22□□□□□ -1.73
SNCA-213ENST00000618500 A0A096LNT2 108 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 URADA6NGE7 173 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 OR6C76A6NM76 312 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 E7ENX8 843 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 PJA2O43164 708 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 GOT2P00505 430 aaKnown RBP4.21□□□□□ -1.73
SNCA-213ENST00000618500 EIF2S1P05198 315 aaKnown RBP4.21□□□□□ -1.73
SNCA-213ENST00000618500 SSR1P43307 286 aaKnown RBP4.21□□□□□ -1.73
SNCA-213ENST00000618500 NR1H2P55055 460 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 CDH17Q12864 832 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 KRTAP24-1Q3LI83 254 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 CHRFAM7AQ494W8 412 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 VASNQ6EMK4 673 aa4.21□□□□□ -1.73
SNCA-213ENST00000618500 SYDE1Q6ZW31 735 aaPredicted RBP4.21□□□□□ -1.73
SNCA-213ENST00000618500 CPNE8Q86YQ8 564 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms