RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 OR8J2Q8NGG1 315 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 DOK4Q8TEW6 326 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 CREB3L4Q8TEY5 395 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 N4BP2L2Q92802 583 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 NELL1Q92832 810 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 RNF31Q96EP0 1072 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 OTUB1Q96FW1 271 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 VPS50Q96JG6 964 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 MAGED4Q96JG8 741 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 ORAI3Q9BRQ5 295 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 REEP4Q9H6H4 257 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 SOX17Q9H6I2 414 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 KIR3DX1Q9H7L2 352 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 MVB12BQ9H7P6 319 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 TPT1P8Q9HAU6 139 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 SLAMF7Q9NQ25 335 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 WASH6PQ9NQA3 447 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 STARD5Q9NSY2 213 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 GPATCH2Q9NW75 528 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 FBXW2Q9UKT8 454 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 OAZ3Q9UMX2 235 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 MAP4K5Q9Y4K4 846 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 U3KQV3 271 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 LRIT2A6NDA9 550 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 NPIPB8E9PQR5 432 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 CASQ2O14958 399 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 ERI3O43414 337 aaKnown RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 DIRAS1O95057 198 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 PDGFBP01127 241 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 TNFP01375 233 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 CTSBP07858 339 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 ACADSP16219 412 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 ZNF26P17031 533 aaPredicted RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 IL10P22301 178 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 CRATP43155 626 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 GZMMP51124 257 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 REEP5Q00765 189 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 HYAL2Q12891 473 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 FAM71E1Q6IPT2 247 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 TMEM214Q6NUQ4 689 aaKnown RBP7.43□□□□□ -1.22
NEK3-207ENST00000617054 GALNT18Q6P9A2 607 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 TBPL2Q6SJ96 375 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 ABI3BPQ7Z7G0 1075 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 DENND6BQ8NEG7 585 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 SLC37A2Q8TED4 501 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 PPCDCQ96CD2 204 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 TM4SF18Q96CE8 201 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 CNBD2Q96M20 576 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 ANKRA2Q9H9E1 313 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 SPATA7Q9P0W8 599 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 MAN2B2Q9Y2E5 1009 aa7.43□□□□□ -1.22
NEK3-207ENST00000617054 TMEM265A0A087WTH1 108 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 A6NCN8 305 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 AQP12BA6NM10 295 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 HCRTR1O43613 425 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 NDUFS2O75306 463 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CREG1O75629 220 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ZNF682O95780 498 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CLIC3O95833 236 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 VIPP01282 170 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 MYF5P13349 255 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ETFAP13804 333 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 JUNDP17535 347 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 SOAT1P35610 550 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 HSD17B2P37059 387 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 HPCAL1P37235 193 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 RABIFP47224 123 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 LSSP48449 732 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 IRX1P78414 480 aaPredicted RBP7.42□□□□□ -1.22
NEK3-207ENST00000617054 HSPB3Q12988 150 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 LAPTM4AQ15012 233 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 LEXMQ3ZCV2 418 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 OTUD3Q5T2D3 398 aaPredicted RBP7.42□□□□□ -1.22
NEK3-207ENST00000617054 SZRD1Q7Z422 152 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 EPHX4Q8IUS5 362 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 AQP12AQ8IXF9 295 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CBR4Q8N4T8 237 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ASB12Q8WXK4 309 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 KLHDC7BQ96G42 594 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 RHBGQ9H310 441 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 TMEM74BQ9NUR3 256 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 THEGQ9P2T0 379 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CPNE7Q9UBL6 633 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ANAPC2Q9UJX6 822 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 HS3ST3A1Q9Y663 406 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CCDC88CQ9P219 2028 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 LOC105369274A0A096LPK9 316 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 C15orf38-AP3S2A0A0A6YYH1 394 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 LOC102723532A0A0G2JNH3 316 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 FAM221BA6H8Z2 402 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 EVPLLA8MZ36 301 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 PGRMC2O15173 223 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CTSVO60911 334 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 GMNNO75496 209 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 EPN2O95208 641 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 KCNK5O95279 499 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 ANXA6P08133 673 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 BCKDHBP21953 392 aa7.42□□□□□ -1.22
NEK3-207ENST00000617054 CERS1P27544 350 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms