RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 RASGRP3Q8IV61 690 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 KLHDC8AQ8IYD2 350 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 PROKR2Q8NFJ6 384 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 OR9Q2Q8NGE9 314 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 OR52N2Q8NGI0 321 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 C2orf15Q8WU43 125 aaKnown RBP14.94□□□□□ -0.02
GPN1-212ENST00000616939 OVCA2Q8WZ82 227 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 TMEM80Q96HE8 168 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 B3GALT6Q96L58 329 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 BBS2Q9BXC9 721 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 MMP28Q9H239 520 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 MIXL1Q9H2W2 232 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 STMN3Q9NZ72 180 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 ATP6V1HQ9UI12 483 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 ENPP4Q9Y6X5 453 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 PRAMEF25A6NGN4 478 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 C1QBP02746 253 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 HIST1H2AGP0C0S8 130 aaPredicted RBP14.94□□□□□ -0.02
GPN1-212ENST00000616939 HIST1H2ADP20671 130 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 IDSP22304 550 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 PTBP1P26599 531 aaKnown RBP eCLIP14.94□□□□□ -0.02
GPN1-212ENST00000616939 CSNK1DP48730 415 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 SGSHP51688 502 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 EEF1A2Q05639 463 aaKnown RBP14.94□□□□□ -0.02
GPN1-212ENST00000616939 ACSM2AQ08AH3 577 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 CHIT1Q13231 466 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 TP53BP2Q13625 1128 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 EFR3AQ14156 821 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 SPHARQ15513 63 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 TRIM60Q495X7 471 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 ACSM2BQ68CK6 577 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 TRAF7Q6Q0C0 670 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 KLHL17Q6TDP4 642 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 GLB1LQ6UWU2 654 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 C11orf74Q86VG3 221 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 ZNF280BQ86YH2 543 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 NAGSQ8N159 534 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 FAM109AQ8N4B1 249 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 NANOGP1Q8N7R0 232 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 ASB11Q8WXH4 323 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 MARVELD3Q96A59 401 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 HIST1H2AHQ96KK5 128 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 FYTTD1Q96QD9 318 aaKnown RBP14.94□□□□□ -0.02
GPN1-212ENST00000616939 HIST1H2AJQ99878 128 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 H2AFJQ9BTM1 129 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 BHLHE41Q9C0J9 482 aaPredicted RBP14.94□□□□□ -0.02
GPN1-212ENST00000616939 KCND3Q9UK17 655 aa14.94□□□□□ -0.02
GPN1-212ENST00000616939 IGLV3-16A0A075B6K0 115 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 A0A0B4J293 547 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 SLC38A8A6NNN8 435 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 PCDH7O60245 1069 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 SOCS5O75159 536 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 CYP7B1O75881 506 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 VNN2O95498 520 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 ADAP00813 363 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 RHCEP18577 417 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 CNR2P34972 360 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 IL12RB1P42701 662 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 MAPK8P45983 427 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 GPR17Q13304 367 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 SCARB2Q14108 478 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 ZNF630Q2M218 657 aaPredicted RBP14.93□□□□□ -0.02
GPN1-212ENST00000616939 ZNF770Q6IQ21 691 aaPredicted RBP14.93□□□□□ -0.02
GPN1-212ENST00000616939 FAM131AQ6UXB0 335 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 TPGS1Q6ZTW0 290 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 USP50Q70EL3 339 aaPredicted RBP14.93□□□□□ -0.02
GPN1-212ENST00000616939 ADGRG2Q8IZP9 1017 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 RNF31Q96EP0 1072 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 VPS35Q96QK1 796 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 GTPBP2Q9BX10 602 aaKnown RBP14.93□□□□□ -0.02
GPN1-212ENST00000616939 MKRN2Q9H000 416 aaKnown RBP14.93□□□□□ -0.02
GPN1-212ENST00000616939 FAM83DQ9H4H8 585 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 TIGARQ9NQ88 270 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 SNTG1Q9NSN8 517 aa14.93□□□□□ -0.02
GPN1-212ENST00000616939 A0A0G2JMP0 313 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 GABRR3A8MPY1 467 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 FADS2P1A8MWK0 482 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 GFYI3L273 518 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 M0R129 80 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 TLR4O00206 839 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 POLR1CO15160 346 aaPredicted RBP14.92□□□□□ -0.02
GPN1-212ENST00000616939 GADD45GO95257 159 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 EOMESO95936 686 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 CYP17A1P05093 508 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 C1SP09871 688 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 AZGP1P25311 298 aaKnown RBP14.92□□□□□ -0.02
GPN1-212ENST00000616939 AQP1P29972 269 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 NKX3-2P78367 333 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 RAE1P78406 368 aaKnown RBP14.92□□□□□ -0.02
GPN1-212ENST00000616939 TRIM71Q2Q1W2 868 aaKnown RBP14.92□□□□□ -0.02
GPN1-212ENST00000616939 PLEKHS1Q5SXH7 462 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 LCN1P1Q5VSP4 162 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 SAXO2Q658L1 398 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 C12orf73Q69YU5 71 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 GRHL2Q6ISB3 625 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 DENND1CQ8IV53 801 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 OXR1Q8N573 874 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 TTC16Q8NEE8 873 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 OR4A15Q8NGL6 344 aa14.92□□□□□ -0.02
GPN1-212ENST00000616939 CREB3L4Q8TEY5 395 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms