RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 LGI4Q8N135 537 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 SLC5A8Q8N695 610 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 THAP3Q8WTV1 239 aaPredicted RBP17.8■□□□□ 0.44
CDX1-202ENST00000616154 TSLPQ969D9 159 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 PEX11GQ96HA9 241 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 UBXN10Q96LJ8 280 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 RBCK1Q9BYM8 510 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 TXNDC16Q9P2K2 825 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 SH3BGRL2Q9UJC5 107 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 PDZD2O15018 2839 aa17.8■□□□□ 0.44
CDX1-202ENST00000616154 ZNF860A6NHJ4 632 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 MAN1A2O60476 641 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 GALR3O60755 368 aaPredicted RBP17.79■□□□□ 0.44
CDX1-202ENST00000616154 CDC123O75794 336 aaPredicted RBP17.79■□□□□ 0.44
CDX1-202ENST00000616154 WISP2O76076 250 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 MLYCDO95822 493 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 GUCA1CO95843 209 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 CD46P15529 392 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 ELAVL4P26378 380 aaKnown RBP17.79■□□□□ 0.44
CDX1-202ENST00000616154 PTGER4P35408 488 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 SLC6A12P48065 614 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 ACTN3Q08043 901 aaPredicted RBP17.79■□□□□ 0.44
CDX1-202ENST00000616154 PWP1Q13610 501 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 ZNF630Q2M218 657 aaPredicted RBP17.79■□□□□ 0.44
CDX1-202ENST00000616154 KBTBD12Q3ZCT8 623 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 GRTP1Q5TC63 336 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 ZNF740Q8NDX6 193 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 OR5T3Q8NGG3 340 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 SLC5A11Q8WWX8 675 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 NEIL2Q969S2 332 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 RHBDF1Q96CC6 855 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 GPR137Q96N19 417 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 HES7Q9BYE0 225 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 PELI2Q9HAT8 420 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 CHST11Q9NPF2 352 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 KLHL1Q9NR64 748 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 ANKRD10Q9NXR5 420 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 CTNNAL1Q9UBT7 734 aa17.79■□□□□ 0.44
CDX1-202ENST00000616154 CDK2AP1O14519 115 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 NDUFS4O43181 175 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 FHP07954 510 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 STMN1P16949 149 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 HTR1EP28566 365 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 EEF1DP29692 281 aaKnown RBP17.78■□□□□ 0.44
CDX1-202ENST00000616154 SPRP35270 261 aaPredicted RBP17.78■□□□□ 0.44
CDX1-202ENST00000616154 GGT5P36269 586 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 HSD17B3P37058 310 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 SCTRP47872 440 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 SLC12A2P55011 1212 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 SLC26A5P58743 744 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 TAS2R50P59544 299 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 ATP6V0D1P61421 351 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 SKP1P63208 163 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 REEP5Q00765 189 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 TGFBIQ15582 683 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 C3AR1Q16581 482 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 KRTCAP3Q53RY4 240 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 SPINK14Q6IE38 97 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 NIPAL1Q6NVV3 410 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 XKRXQ6PP77 449 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 THOC6Q86W42 341 aaKnown RBP17.78■□□□□ 0.44
CDX1-202ENST00000616154 TMEM178AQ8NBL3 297 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 TBC1D20Q96BZ9 403 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 FRMD6Q96NE9 622 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 CAB39LQ9H9S4 337 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 ZNF835Q9Y2P0 537 aa17.78■□□□□ 0.44
CDX1-202ENST00000616154 CSMD2Q7Z408 3487 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 GABRR3A8MPY1 467 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 OR1F1O43749 312 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 CD1DP15813 335 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 ALOX12P18054 663 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 AGAP20933 346 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 JAK1P23458 1154 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 AHRP35869 848 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 OR4D2P58180 307 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 RAB10P61026 200 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 ADORA2A-AS1P86434 159 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 MEF2AQ02078 507 aaPredicted RBP17.77■□□□□ 0.44
CDX1-202ENST00000616154 ALDH6A1Q02252 535 aaKnown RBP17.77■□□□□ 0.44
CDX1-202ENST00000616154 CATSPEREQ5SY80 951 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 Q6ZPB1 254 aaPredicted RBP17.77■□□□□ 0.44
CDX1-202ENST00000616154 HORMAD2Q8N7B1 307 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 NT5CQ8TCD5 201 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 ELP5Q8TE02 316 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 FBF1Q8TES7 1133 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 MAGED4Q96JG8 741 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 SPNS1Q9H2V7 528 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 ACSS3Q9H6R3 686 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 ARGLU1Q9NWB6 273 aaPredicted RBP17.77■□□□□ 0.44
CDX1-202ENST00000616154 ZFP69BQ9UJL9 534 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 TINAGQ9UJW2 476 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 SLC22A14Q9Y267 594 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 KCNE2Q9Y6J6 123 aa17.77■□□□□ 0.44
CDX1-202ENST00000616154 DCHS2Q6V1P9 2916 aa17.77■□□□□ 0.43
CDX1-202ENST00000616154 FAM227AF5H4B4 570 aa17.76■□□□□ 0.43
CDX1-202ENST00000616154 PHGDHO43175 533 aaKnown RBP17.76■□□□□ 0.43
CDX1-202ENST00000616154 CHST10O43529 356 aa17.76■□□□□ 0.43
CDX1-202ENST00000616154 NEURL1O76050 574 aa17.76■□□□□ 0.43
CDX1-202ENST00000616154 ACSL3O95573 720 aa17.76■□□□□ 0.43
CDX1-202ENST00000616154 NUDT17P0C025 328 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms