RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ARMC10Q8N2F6 343 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 NKAPQ8N5F7 415 aaKnown RBP19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 APCDD1LQ8NCL9 501 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 TMEM125Q96AQ2 219 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 LRRC39Q96DD0 335 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 EGFL8Q99944 293 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 GPAMQ9HCL2 828 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 OARD1Q9Y530 152 aa19.41■□□□□ 0.7
TRAPPC3-208ENST00000616074 TRBV11-1A0A0K0K1C0 115 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 FAM95CA0A1B0GW59 222 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 PTGER1P34995 402 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 KIR3DL1P43629 444 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 MEOX1P50221 254 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 BTN3A2P78410 334 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 FRG1Q14331 258 aaKnown RBP19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 C18orf21Q32NC0 220 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 ANKMY2Q8IV38 441 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 ARMC2Q8NEN0 867 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 B3GNT7Q8NFL0 401 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 ANKRD49Q8WVL7 239 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 ANKRD7Q92527 254 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 PDLIM2Q96JY6 352 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 MMACHCQ9Y4U1 282 aa19.4■□□□□ 0.7
TRAPPC3-208ENST00000616074 A0A0G2JN53 185 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 PRRG2O14669 202 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 ADAM10O14672 748 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 MYO1DO94832 1006 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 WDR47O94967 919 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 HNRNPH1P31943 449 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 RFC3P40938 356 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 GDF5P43026 501 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 CLCN2P51788 898 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 ARL4CP56559 192 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 TAS2R39P59534 338 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 MGAT5Q09328 741 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 TSNQ15631 228 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 SULF2Q8IWU5 870 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 SCUBE1Q8IWY4 988 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 KLHL7Q8IXQ5 586 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 PHF10Q8WUB8 498 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 GAL3ST3Q96A11 431 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 DMRTA2Q96SC8 542 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 ZNF223Q9UK11 482 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 KLF13Q9Y2Y9 288 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 POLQO75417 2590 aa19.39■□□□□ 0.69
TRAPPC3-208ENST00000616074 E9PLN8 166 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 TGFBR3LH3BV60 316 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 TFECO14948 347 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 ZSCAN12O43309 604 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 C1GALT1C1LP0DN25 315 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 TCP1P17987 556 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 GNAZP19086 355 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 PPP2R1BP30154 601 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 SLC6A12P48065 614 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 HNMTP50135 292 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 STXBP1P61764 594 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 DR1Q01658 176 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 RUNX2Q13950 521 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 SLBPQ14493 270 aaKnown RBP eCLIP19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 FASTKD3Q14CZ7 662 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 TERF2Q15554 542 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 SLCO4C1Q6ZQN7 724 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 SYDE1Q6ZW31 735 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 FRA10AC1Q70Z53 315 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 CEP97Q8IW35 865 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 KLHDC8AQ8IYD2 350 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 POGLUT1Q8NBL1 392 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 TMEM52Q8NDY8 209 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 FBXO36Q8NEA4 188 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 RHBDF1Q96CC6 855 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 MS4A6EQ96DS6 147 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 FAR2Q96K12 515 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 CAPZA3Q96KX2 299 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 VKORC1Q9BQB6 163 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 PNO1Q9NRX1 252 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 TRMT1Q9NXH9 659 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 CTNNAL1Q9UBT7 734 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 FBXW2Q9UKT8 454 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 CLDN16Q9Y5I7 305 aa19.38■□□□□ 0.69
TRAPPC3-208ENST00000616074 TP73O15350 636 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 ERI3O43414 337 aaKnown RBP19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 ITGA10O75578 1167 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 SEC31AO94979 1220 aaKnown RBP19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 HNRNPFP52597 415 aaKnown RBP19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 TMIGD1Q6UXZ0 262 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 ADAMTSL2Q86TH1 951 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 CYP4Z2PQ8N1L4 340 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 TMEM156Q8N614 296 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 CCT6BQ92526 530 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 NCLNQ969V3 563 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 VMP1Q96GC9 406 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 NPLQ9BXD5 320 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 PRTFDC1Q9NRG1 225 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 MOCS1Q9NZB8 636 aa19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 PPIEQ9UNP9 301 aaKnown RBP19.37■□□□□ 0.69
TRAPPC3-208ENST00000616074 A0A1B0GTH9 108 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 LRIT2A6NDA9 550 aa19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 NCF1BA6NI72 391 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 NCF1CA8MVU1 366 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC3-208ENST00000616074 KLRC4-KLRK1H3BQV0 150 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms