RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SERGEFQ9UGK8 458 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 RAPGEFL1Q9UHV5 662 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 LEF1Q9UJU2 399 aaPredicted RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 MED16Q9Y2X0 877 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 OAS3Q9Y6K5 1087 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 ASPDHA6ND91 283 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 NCF1BA6NI72 391 aaPredicted RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 NCF1CA8MVU1 366 aaPredicted RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 BTN3A1O00481 513 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 ATG13O75143 517 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 EEDO75530 441 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 SLC22A3O75751 556 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 MLYCDO95822 493 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 UROSP10746 265 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 NCF1P14598 390 aaPredicted RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 IL7RP16871 459 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 BPIP17213 487 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 GTF2E2P29084 291 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 MC4RP32245 332 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 ARSFP54793 590 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 EEFSECP57772 596 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 UFM1P61960 85 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 TNK1Q13470 666 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 DAG1Q14118 895 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 RBBP7Q16576 425 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 PAGE3Q5JUK9 113 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 TPRG1LQ5T0D9 272 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 PLEKHM3Q6ZWE6 761 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 SYT13Q7L8C5 426 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 PTRH1Q86Y79 214 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 TEX37Q96LM6 180 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 FERD3LQ96RJ6 166 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 KAT8Q9H7Z6 458 aaKnown RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 POLMQ9NP87 494 aaPredicted RBP12.57□□□□□ -0.4
FOXN3-219ENST00000615335 EHD3Q9NZN3 535 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 CD84Q9UIB8 345 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 PCDHGB6Q9Y5F9 930 aa12.57□□□□□ -0.4
FOXN3-219ENST00000615335 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 TCRBV5S2A0A599 114 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 CLDN24A6NM45 220 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 CHURC1-FNTBB4DL54 471 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 PLD2O14939 933 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 SPINT1O43278 529 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 PI15O43692 258 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 PAHP00439 452 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 C1SP09871 688 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 NCK1P16333 377 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 PRDX3P30048 256 aaKnown RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 CSTF2P33240 577 aaKnown RBP eCLIP12.56□□□□□ -0.44e-7■■■■□ 19.8
FOXN3-219ENST00000615335 GGT5P36269 586 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 CASP2P42575 452 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 AGTR2P50052 363 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 POLR2JP52435 117 aaKnown RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 LSM3P62310 102 aaKnown RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 EMX1Q04741 257 aaPredicted RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 FAPQ12884 760 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 MFSD13AQ14CX5 517 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 IMPG1Q17R60 797 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 ZRANB3Q5FWF4 1079 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 XKR7Q5GH72 579 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 SYT6Q5T7P8 510 aaPredicted RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 AGBL4Q5VU57 503 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 GARNL3Q5VVW2 1013 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 SCIMPQ6UWF3 145 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 FAM151BQ6UXP7 276 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 LIPIQ6XZB0 460 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 PGBD3Q8N328 593 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 AMER2Q8N7J2 671 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 HMGB4Q8WW32 186 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 SLC7A6Q92536 515 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 ZNF566Q969W8 418 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 BIRC7Q96CA5 298 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 C1QTNF3Q9BXJ4 246 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 ROGDIQ9GZN7 287 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 MRPL39Q9NYK5 338 aaKnown RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 CCDC59Q9P031 241 aaKnown RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 PCTPQ9UKL6 214 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 PCDHB3Q9Y5E6 796 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 AUP1Q9Y679 476 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 NDUFV2P19404 249 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 MAGP20916 626 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 ALDH4A1P30038 563 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 ZFP36L2P47974 494 aaKnown RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 DGKEP52429 567 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 NCS1P62166 190 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 ZXDAP98168 799 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 GAS6Q14393 721 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 TIGD3Q6B0B8 471 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 ARSKQ6UWY0 536 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 HSD11B1LQ7Z5J1 315 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 GPR26Q8NDV2 337 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 PJA1Q8NG27 643 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 OR56A4Q8NGH8 313 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 BRINP2Q9C0B6 783 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 CCDC90BQ9GZT6 254 aa12.56□□□□□ -0.4
FOXN3-219ENST00000615335 NXF2Q9GZY0 626 aaKnown RBP12.56□□□□□ -0.4
FOXN3-219ENST00000615335 NIPAL2Q9H841 368 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms