RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ZYG11AQ6WRX3 759 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 BHLHA9Q7RTU4 235 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 HIPK1Q86Z02 1210 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 C1orf52Q8N6N3 182 aaKnown RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 OR8H1Q8NGG4 311 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 PHF7Q9BWX1 381 aaPredicted RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 GSDMCQ9BYG8 508 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 SP140LQ9H930 580 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 PNO1Q9NRX1 252 aaKnown RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 USE1Q9NZ43 259 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 C5AR2Q9P296 337 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 MAU2Q9Y6X3 613 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 A0A0G2JMZ2 1700 aa10.44□□□□□ -0.74
FAM3A-221ENST00000612856 INTS1Q8N201 2190 aaKnown RBP10.44□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF701M0R085 212 aaPredicted RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SDHDO14521 159 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SOCS5O75159 536 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SLC16A8O95907 504 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PRLP01236 227 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 TIMP2P16035 220 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 IL1RNP18510 177 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 DRD1P21728 446 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 P2RY2P41231 377 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 BTN3A2P78410 334 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 NPTX1Q15818 432 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 IL22RA1Q8N6P7 574 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 TRMT2BQ96GJ1 504 aaKnown RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF419Q96HQ0 510 aaPredicted RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 GFM1Q96RP9 751 aaKnown RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 KIFC1Q9BW19 673 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 EIF2B3Q9NR50 452 aaKnown RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PLSCR3Q9NRY6 295 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 CCM2LQ9NUG4 571 aaPredicted RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 ERVK13-1Q9NX77 482 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF224Q9NZL3 707 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 GPR34Q9UPC5 381 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 TPRKBQ9Y3C4 175 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PLEKHM1Q9Y4G2 1056 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF780BQ9Y6R6 833 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 CHURC1-FNTBB4DL54 471 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 I3L521 148 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 KMOO15229 486 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 AIREO43918 545 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SCO1O75880 301 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 CHRM5P08912 532 aaPredicted RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF30P17039 623 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 C5AR1P21730 350 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 NOS3P29474 1203 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 CSTF2P33240 577 aaKnown RBP eCLIP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 FNTBP49356 437 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 RAB25P57735 213 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 MTPNP58546 118 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 TRAP1Q12931 704 aaKnown RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 BNIP2Q12982 314 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 KRR1Q13601 381 aaKnown RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PXDC1Q5TGL8 231 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 ZDHHC20Q5W0Z9 365 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 KLHL17Q6TDP4 642 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 LIX1Q8N485 282 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 OR52B6Q8NGF0 335 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SLC13A3Q8WWT9 602 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PATE1Q8WXA2 126 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SLCO4A1Q96BD0 722 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 LMAN2LQ9H0V9 348 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 C8orf33Q9H7E9 229 aaPredicted RBP10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PRSS16Q9NQE7 514 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 G3V2L1 256 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PPP6CO00743 305 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PRKACAP17612 351 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 CCT8P50990 548 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 NFKB2Q00653 900 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SLC36A3Q495N2 470 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 CPTPQ5TA50 214 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF544Q6NX49 715 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 TICAM1Q8IUC6 712 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SPARTQ8N0X7 666 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 SLC44A3Q8N4M1 653 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 ANKFN1Q8N957 763 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 OR4F6Q8NGB9 312 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 OR4K1Q8NGD4 311 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 OR5H6Q8NGV6 325 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 TANKQ92844 425 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 UBE2E3Q969T4 207 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 PPP3R2Q96LZ3 170 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 DPH7Q9BTV6 452 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 IL17CQ9P0M4 197 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 RPS6KB2Q9UBS0 482 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 DOCK6Q96HP0 2047 aa10.43□□□□□ -0.74
FAM3A-221ENST00000612856 POM121BA6NF01 834 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 K7ESM1 405 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 NME4O00746 187 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 S1PR4O95977 384 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 BMP2P12643 396 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 SHMT2P34897 504 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 IDH2P48735 452 aaKnown RBP10.42□□□□□ -0.74
FAM3A-221ENST00000612856 GSK3BP49841 420 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 RUNX1T1Q06455 604 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 MRPL58Q14197 206 aaKnown RBP10.42□□□□□ -0.74
FAM3A-221ENST00000612856 TYSND1Q2T9J0 566 aa10.42□□□□□ -0.74
FAM3A-221ENST00000612856 TPRG1LQ5T0D9 272 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms