RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PRRT3Q5FWE3 981 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MFSD14BQ5SR56 506 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM91A1Q658Y4 838 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MAMDC4Q6UXC1 1216 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 DPP8Q6V1X1 898 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM182Q6ZP80 229 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 RNF207Q6ZRF8 634 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 EIF3MQ7L2H7 374 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 AMIGO2Q86SJ2 522 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 VRK2Q86Y07 508 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CPNE8Q86YQ8 564 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MISPQ8IVT2 679 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM185AQ8NFB2 350 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ST8SIA2Q92186 375 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 HHIPL1Q96JK4 782 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PANX3Q96QZ0 392 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TEKT3Q9BXF9 490 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ROPN1BQ9BZX4 212 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 BHLHE41Q9C0J9 482 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 AGO3Q9H9G7 860 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 UNKLQ9H9P5 680 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ROPN1Q9HAT0 212 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 KCNK12Q9HB15 430 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 BTG4Q9NY30 223 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTL7AQ9Y615 435 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF609O15014 1411 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM82A0PJX8 343 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ISPDA4D126 451 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 LINC00862A6NCI5 91 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ANKDD1BA6NHY2 528 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 E7EWF7 191 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ZBTB5O15062 677 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 HS6ST1O60243 411 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 TBX19O60806 448 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SNNO75324 88 aaPredicted RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SCG5P05408 212 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 PSKH1P11801 424 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 DARSP14868 501 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 TAC1P20366 129 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ALDH3B1P43353 468 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CSNK1DP48730 415 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ANXA11P50995 505 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 B4GALNT1Q00973 533 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CNTN2Q02246 1040 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 BNIP3Q12983 259 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 IKZF1Q13422 519 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SPA17Q15506 151 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 DECR1Q16698 335 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ZFP69Q49AA0 526 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 NKAIN1Q4KMZ8 207 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 DNAL1Q4LDG9 190 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 XKRXQ6PP77 449 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ZPBP2Q6X784 338 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 UBE3DQ7Z6J8 389 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 VTCN1Q7Z7D3 282 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 NEK8Q86SG6 692 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 HORMAD1Q86X24 394 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 MCOLN2Q8IZK6 566 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 DUS3LQ96G46 650 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 RCC1LQ96I51 464 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SPATA33Q96N06 139 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 FOPNLQ96NB1 174 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CCNL2Q96S94 520 aaPredicted RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ZMYND12Q9H0C1 365 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 NEUROG2Q9H2A3 272 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 GAL3ST2Q9H3Q3 398 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 MTG2Q9H4K7 406 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SERHLQ9NQF3 203 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 ZCCHC3Q9NUD5 404 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM118AQ9NWS6 357 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 GCNT4Q9P109 453 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CNTNAP5Q8WYK1 1306 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A1W2PQC6 194 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 FBLL1A6NHQ2 334 aaKnown RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 C4orf47A7E2U8 309 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 H3BQ06 376 aaPredicted RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 GPAA1O43292 621 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 OIP5O43482 229 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SCN2BO60939 215 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CCNB2O95067 398 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 LDOC1O95751 146 aaPredicted RBP4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CER1O95813 267 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SERPINB2P05120 415 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 VSIG8P0DPA2 414 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CD19P15391 556 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 RAB4AP20338 218 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 MMP8P22894 467 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 UQCRC1P31930 480 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 HMGCLP35914 325 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 MMP12P39900 470 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 GNPDA1P46926 289 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SUOXP51687 545 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CLCN5P51795 746 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 GNA12Q03113 381 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CACNG1Q06432 222 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 BNIP2Q12982 314 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 RCAN2Q14206 197 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CHRNA2Q15822 529 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC18A3Q16572 532 aa4.82□□□□□ -1.64
SPTBN1-206ENST00000602898 CA9Q16790 459 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms