RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 B3GALT4O96024 378 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 CTSBP07858 339 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 ENGP17813 658 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 CSF2RBP32927 897 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 CFHR1Q03591 330 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 SMU1Q2TAY7 513 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 DEFB110Q30KQ9 67 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 VPS26BQ4G0F5 336 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 NADK2Q4G0N4 442 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 TIGD2Q4W5G0 525 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 KHDRBS2Q5VWX1 349 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 FRMPD2BQ6IN97 320 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 FBXO42Q6P3S6 717 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 GUSBP11Q6P575 273 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 RBM44Q6ZP01 1051 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 UBE3DQ7Z6J8 389 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 Q8N9G6 341 aaPredicted RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 AVL9Q8NBF6 648 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 MFSD9Q8NBP5 474 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 GFM2Q969S9 779 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 ROPN1LQ96C74 230 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 MAP3K3Q99759 626 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 SARGQ9BW04 601 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 SEMA6AQ9H2E6 1030 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 FAM60AQ9NP50 221 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 TMEM9Q9P0T7 183 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 PILRAQ9UKJ1 303 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 PADI4Q9UM07 663 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 BTBD3Q9Y2F9 522 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 ARID1BQ8NFD5 2236 aaPredicted RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 LOC105369274A0A096LPK9 316 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 LOC102723532A0A0G2JNH3 316 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 NDUFS4O43181 175 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 EEDO75530 441 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 TIA1P31483 386 aaKnown RBP eCLIP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 IRAK1BP1Q5VVH5 260 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 ARMC6Q6NXE6 501 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 OR4N4Q8N0Y3 316 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 METTL4Q8N3J2 472 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 EID2Q8N6I1 236 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 AMER3Q8N944 861 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 CDC26Q8NHZ8 85 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 BAHD1Q8TBE0 780 aaPredicted RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 CCDC74AQ96AQ1 378 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 TGM7Q96PF1 710 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 PRPF18Q99633 342 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 PITHD1Q9GZP4 211 aaPredicted RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 RBM38Q9H0Z9 239 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 ZIM2Q9NZV7 527 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 PPT2Q9UMR5 302 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 AK5Q9Y6K8 562 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 IGHV1OR21-1A0A087WYE8 117 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 MYOCOSA0A1B0GUC4 107 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 BBIP1A8MTZ0 92 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 PRR33A8MZF0 331 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 B4GAT1O43505 415 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 NUDT21O43809 227 aaKnown RBP16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC22A3O75751 556 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 GRK3P35626 688 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 PPM1FP49593 454 aaPredicted RBP16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC7A2P52569 658 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 DGKQP52824 942 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 PHEXP78562 749 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 MAD2L1Q13257 205 aaPredicted RBP16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 RCAN2Q14206 197 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 NRF1Q16656 503 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 AMZ1Q400G9 498 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 C10orf62Q5T681 223 aaPredicted RBP16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 DEPDC1Q5TB30 811 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 CACHD1Q5VU97 1274 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 ZCCHC8Q6NZY4 707 aaKnown RBP16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 BLOC1S3Q6QNY0 202 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 CYP2R1Q6VVX0 501 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 RABEPKQ7Z6M1 372 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 MINDY1Q8N5J2 469 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 NMD3Q96D46 503 aaKnown RBP16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 OR2A5Q96R48 311 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 GPATCH1Q9BRR8 931 aaKnown RBP16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC39A3Q9BRY0 314 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 GRIP2Q9C0E4 1043 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 PTTG2Q9NZH5 202 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 KLHL3Q9UH77 587 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 AP1M2Q9Y6Q5 423 aa16.52■□□□□ 0.24
PPFIA3-207ENST00000602716 ARHGAP10A1A4S6 786 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 CAPN5O15484 640 aaPredicted RBP16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 PCDH7O60245 1069 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 CLEC3AO75596 197 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 ATP6V1B1P15313 513 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 GLB1P16278 677 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 JAK1P23458 1154 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 TXNL4AP83876 142 aaKnown RBP16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 SPIN4Q56A73 249 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 MTX3Q5HYI7 312 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 PERM1Q5SV97 790 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 HMBOX1Q6NT76 420 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 MMP21Q8N119 569 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 RUVBL1Q9Y265 456 aaKnown RBP16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 TMED5Q9Y3A6 229 aa16.52■□□□□ 0.23
PPFIA3-207ENST00000602716 KLK4Q9Y5K2 254 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms