RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 CERS1P27544 350 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 ARL1P40616 181 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 PIK3CBP42338 1070 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 HTR6P50406 440 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 HNRNPFP52597 415 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 EMP2P54851 167 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 FOXA1P55317 472 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 RHDQ02161 417 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 LY6DQ14210 128 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 GGTA1PQ4G0N0 100 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 SGO1Q5FBB7 561 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 KHDRBS2Q5VWX1 349 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 CES4AQ5XG92 561 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 CDYL2Q8N8U2 506 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 CCDC63Q8NA47 563 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 RDH11Q8TC12 318 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 PPP4R1Q8TF05 950 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 THAP4Q8WY91 577 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 PGM2Q96G03 612 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 KCNA7Q96RP8 456 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 SMC6Q96SB8 1091 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 ZNF382Q96SR6 550 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 SEMA4CQ9C0C4 833 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 VN1R1Q9GZP7 353 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 P4HTMQ9NXG6 502 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 NXT1Q9UKK6 140 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 MKL2Q9ULH7 1088 aa13.41□□□□□ -0.26
SHKBP1-217ENST00000598558 URADA6NGE7 173 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 K7EM74 188 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 FOXE1O00358 373 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 PLPP1O14494 284 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 CDC123O75794 336 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 PDYNP01213 254 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 CHN1P15882 459 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 ATP5A1P25705 553 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 ARRB2P32121 409 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 BTG2P78543 158 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 RHAGQ02094 409 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 SOWAHCQ53LP3 525 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 FRG2Q64ET8 278 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 BORAQ6PGQ7 559 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 TMEM205Q6UW68 189 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 FRMD7Q6ZUT3 714 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 LANCL3Q6ZV70 420 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 GPRIN3Q6ZVF9 776 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 AGAP11Q8TF27 550 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 CMTM7Q96FZ5 175 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 FRG2BQ96QU4 278 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 HBEGFQ99075 208 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 SHCBP1LQ9BZQ2 653 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 TMBIM4Q9HC24 238 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 SEMA3GQ9NS98 782 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 KCMF1Q9P0J7 381 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 TRPS1Q9UHF7 1281 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 MAN2B2Q9Y2E5 1009 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 TIMM22Q9Y584 194 aa13.4□□□□□ -0.26
SHKBP1-217ENST00000598558 TGFBR3LH3BV60 316 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 MANBAO00462 879 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 B4GALT2O60909 372 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 EEDO75530 441 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 HEXBP07686 556 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 PTX3P26022 381 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 SERPINB3P29508 390 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 SERPINB1P30740 379 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 BSGP35613 385 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 Q0VFX4 171 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 LCP2Q13094 533 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 TMEM35AQ53FP2 167 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 LIPMQ5VYY2 423 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 TRIM40Q6P9F5 258 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 SCIMPQ6UWF3 145 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 ZCCHC23Q6ZST2 131 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 CHSY3Q70JA7 882 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 ACOT4Q8N9L9 421 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 OR11G2Q8NGC1 345 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 OR6Y1Q8NGX8 325 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 APOBEC4Q8WW27 367 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 TSLPQ969D9 159 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 ARL8AQ96BM9 186 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 TBC1D20Q96BZ9 403 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 TLCD1Q96CP7 247 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 CCDC126Q96EE4 140 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 FAR2Q96K12 515 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 CSF3RQ99062 836 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 TBCDQ9BTW9 1192 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 ING2Q9H160 280 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 C14orf105Q9NVL8 296 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 PSD3Q9NYI0 1048 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 SENP1Q9P0U3 644 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 ADGRE2Q9UHX3 823 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 FBXL4Q9UKA2 621 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 CLDN16Q9Y5I7 305 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 ZFYVE26Q68DK2 2539 aa13.39□□□□□ -0.27
SHKBP1-217ENST00000598558 IGHV3-20A0A0C4DH32 117 aa13.38□□□□□ -0.27
SHKBP1-217ENST00000598558 WASHC1A8K0Z3 465 aa13.38□□□□□ -0.27
SHKBP1-217ENST00000598558 ERVH48-1M5A8F1 160 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms