RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ASB1Q9Y576 335 aa12.94□□□□□ -0.34
SCAF1-203ENST00000598359 HMGB1P1B2RPK0 211 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-203ENST00000598359 KRT38O76015 456 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ICAM2P13598 275 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 GNAZP19086 355 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 MAOAP21397 527 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 HNRNPH1P31943 449 aaKnown RBP12.93□□□□□ -0.34
SCAF1-203ENST00000598359 AGTR2P50052 363 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 OR4D2P58180 307 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 RAB10P61026 200 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ACTN3Q08043 901 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ZNF844Q08AG5 666 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ELOAQ14241 798 aaKnown RBP12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ZKSCAN8Q15776 578 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-203ENST00000598359 AGBL2Q5U5Z8 902 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 CEP128Q6ZU80 1094 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 TRMT10CQ7L0Y3 403 aaKnown RBP12.93□□□□□ -0.34
SCAF1-203ENST00000598359 CROCCP2Q86T23 111 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 KLHDC8AQ8IYD2 350 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 CYP4X1Q8N118 509 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 BEST3Q8N1M1 668 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 SNX31Q8N9S9 440 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 PLPP5Q8NEB5 264 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 TRPV3Q8NET8 790 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 FAM76AQ8TAV0 307 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 FAR1Q8WVX9 515 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 UBLCP1Q8WVY7 318 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-203ENST00000598359 HAS2Q92819 552 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ARL8AQ96BM9 186 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ATP6V1G3Q96LB4 118 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 OR1F2PQ96R84 312 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 TAAR6Q96RI8 345 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 NPAS2Q99743 824 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 PHACTR1Q9C0D0 580 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ALG9Q9H6U8 611 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 KCNK13Q9HB14 408 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ANKRD10Q9NXR5 420 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 STMN3Q9NZ72 180 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 CD274Q9NZQ7 290 aa12.93□□□□□ -0.34
SCAF1-203ENST00000598359 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-203ENST00000598359 FBN2P35556 2912 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 HIVEP3Q5T1R4 2406 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 TRAV17A0A0B4J275 112 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 A8MUA0 341 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 MAGEB17A8MXT2 336 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
SCAF1-203ENST00000598359 SERPINA6P08185 405 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 GSTA2P09210 222 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 SLC35E2BP0CK96 405 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 SMIM10L1P0DMW3 83 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 SPRP35270 261 aaPredicted RBP12.92□□□□□ -0.34
SCAF1-203ENST00000598359 BTN3A2P78410 334 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 PMP22Q01453 160 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 BMPR2Q13873 1038 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 GRTP1Q5TC63 336 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 FAM180AQ6UWF9 173 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 TMIGD1Q6UXZ0 262 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 RAPH1Q70E73 1250 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 CYS1Q717R9 158 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 VN1R5Q7Z5H4 357 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 CRLF3Q8IUI8 442 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 CPAMD8Q8IZJ3 1885 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 CA13Q8N1Q1 262 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 KIF2BQ8N4N8 673 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 ST6GALNAC3Q8NDV1 305 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 SMIM10Q96HG1 83 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 UBXN10Q96LJ8 280 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 PTCHD1Q96NR3 888 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 SCN2AQ99250 2005 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 DNAJC11Q9NVH1 559 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 RNF112Q9ULX5 631 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 OSGIN2Q9Y236 505 aa12.92□□□□□ -0.34
SCAF1-203ENST00000598359 OR5H15A6NDH6 313 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 CLGNO14967 610 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 CCNT2O60583 730 aaKnown RBP12.91□□□□□ -0.34
SCAF1-203ENST00000598359 PRMT3O60678 531 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
SCAF1-203ENST00000598359 STK16O75716 305 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 WISP2O76076 250 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 TBX6O95947 436 aaPredicted RBP12.91□□□□□ -0.34
SCAF1-203ENST00000598359 LDLRP01130 860 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 CYC1P08574 325 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 RNH1P13489 461 aaKnown RBP12.91□□□□□ -0.34
SCAF1-203ENST00000598359 EPORP19235 508 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 TFEBP19484 476 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 CD22P20273 847 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 IL10P22301 178 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 JAK1P23458 1154 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 STX2P32856 288 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 GGT5P36269 586 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 SLC26A5P58743 744 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 ATP6V0D1P61421 351 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 IRF9Q00978 393 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 RUNX2Q13950 521 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 DOC2AQ14183 400 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 XKR6Q5GH73 641 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 ACER2Q5QJU3 275 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 CEP85LQ5SZL2 805 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 SULT1C3Q6IMI6 304 aa12.91□□□□□ -0.34
SCAF1-203ENST00000598359 H3F3CQ6NXT2 135 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms