RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 Q6ZSR6 202 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 IKBIPQ70UQ0 350 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 FRMD1Q8N878 549 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 OR2L3Q8NG85 312 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 OR4E2Q8NGC2 313 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 TFAP2CQ92754 450 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 TMBIM1Q969X1 311 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 MACROD1Q9BQ69 325 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 TRIM4Q9C037 500 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 SLC6A16Q9GZN6 736 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 SYNPO2LQ9H987 977 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 GPATCH2Q9NW75 528 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 KLHL20Q9Y2M5 609 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 GMEB1Q9Y692 573 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 SNRNP200O75643 2136 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 PLXND1Q9Y4D7 1925 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 A0A0G2JN53 185 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 NDUFS4O43181 175 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 CCNDBP1O95273 360 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 SERPIND1P05546 499 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 LINGO3P0C6S8 592 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 RPL3P39023 403 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 MVDP53602 400 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 MAPK12P53778 367 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 IST1P53990 364 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 CASP9P55211 416 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 SRP54P61011 504 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 LRRC23Q53EV4 343 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 WASH2PQ6VEQ5 465 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 NAGSQ8N159 534 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 MTERF3Q96E29 417 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 ZNF282Q9UDV7 671 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 CYP8B1Q9UNU6 501 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 HEBP2Q9Y5Z4 205 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 COLEC10Q9Y6Z7 277 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 TRBC2A0A5B9 178 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 A6NCN8 305 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 TNFRSF10CO14798 259 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 HAT1O14929 419 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 CAPN5O15484 640 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 TMPRSS11DO60235 418 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 LRRC74AQ0VAA2 488 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 GAS6Q14393 721 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 C11orf91Q3C1V1 193 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 COX20Q5RI15 118 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 IYDQ6PHW0 289 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 BMP8AQ7Z5Y6 402 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 NRROSQ86YC3 692 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 SLC22A18ASQ8N1D0 253 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 OR13H1Q8NG92 308 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 MAL2Q969L2 176 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 PYURFQ96I23 114 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 DPH7Q9BTV6 452 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 TMEM121BQ9BXQ6 578 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 KLHL31Q9H511 634 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 MAGIXQ9H6Y5 334 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 MIEF1Q9NQG6 463 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 PDP2Q9P2J9 529 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 ACSL6Q9UKU0 697 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 PCOLCE2Q9UKZ9 415 aa16.25■□□□□ 0.19
SHKBP1-216ENST00000598201 EME2A4GXA9 379 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 CLEC3AO75596 197 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 CST1P01037 141 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 GNAO1P09471 354 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 IL1RNP18510 177 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 SLC19A1P41440 591 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 OTUD3Q5T2D3 398 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 KIAA1614Q5VZ46 1190 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 ERICH5Q6P6B1 374 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 AMIGO1Q86WK6 493 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 FAM47BQ8NA70 645 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 MAGEE2Q8TD90 523 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 LCN9Q8WX39 176 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 RGMAQ96B86 450 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 TOE1Q96GM8 510 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 TEFMQ96QE5 360 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 SLC35A5Q9BS91 424 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 ANKRD60Q9BZ19 345 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 CHRDQ9H2X0 955 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 DNAJB9Q9UBS3 223 aa16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 GOLGA4Q13439 2230 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-216ENST00000598201 LRIT2A6NDA9 550 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 CHURC1-FNTBB4DL54 471 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 ZNF682O95780 498 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 CHRM5P08912 532 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 FAM58BPP0C7Q3 252 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 SMIM18P0DKX4 95 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 NELFEP18615 380 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 DDCP20711 480 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 KDELR2P33947 212 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 PLA2G16P53816 162 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 YPEL5P62699 121 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 HYAL2Q12891 473 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 PAGE2Q7Z2X7 111 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 OR5AK3PQ8NH89 298 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 UCN3Q969E3 161 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 ADI1Q9BV57 179 aa16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 POLMQ9NP87 494 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-216ENST00000598201 SLAMF7Q9NQ25 335 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms