RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 RUBCNLQ9H714 662 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 PELI2Q9HAT8 420 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 ITGB1BP2Q9UKP3 347 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 VWA7Q9Y334 891 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 DYRK1BQ9Y463 629 aa11.31□□□□□ -0.6
SOX2-OT-228ENST00000597828 PRKNO60260 465 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 PIAS1O75925 651 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 MYO1DO94832 1006 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 MLYCDO95822 493 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 ENO2P09104 434 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 RNH1P13489 461 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 HNRNPH1P31943 449 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 GDF5P43026 501 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 CYB561P49447 251 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 SMSP52788 366 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 GPR85P60893 370 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 FASTKD3Q14CZ7 662 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 FBXO48Q5FWF7 155 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 STEAP4Q687X5 459 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 NXPE4Q6UWF7 544 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 C16orf47Q6ZP98 133 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 STRA8Q7Z7C7 330 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 TBC1D19Q8N5T2 526 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 HORMAD2Q8N7B1 307 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 APCDD1LQ8NCL9 501 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 ANKRD49Q8WVL7 239 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 DMRTA2Q96SC8 542 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 EGFL8Q99944 293 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 AIF1LQ9BQI0 150 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 PRDM9Q9NQV7 894 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 ZFATQ9P243 1243 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 SNX12Q9UMY4 172 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 CLDN16Q9Y5I7 305 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 TEX264Q9Y6I9 313 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
SOX2-OT-228ENST00000597828 DOCK7Q96N67 2140 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 MYOCOSA0A1B0GUC4 107 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 FAM95CA0A1B0GW59 222 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 PSMD12O00232 456 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 TFECO14948 347 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 HS6ST1O60243 411 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 CDC40O60508 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 WDR47O94967 919 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 AGAP20933 346 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 HLCSP50747 726 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 GNG11P61952 73 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 SKP1P63208 163 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 RUNX2Q13950 521 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 TSNQ15631 228 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 MDGA2Q7Z553 956 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 CD163Q86VB7 1156 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 CEP97Q8IW35 865 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 SULF2Q8IWU5 870 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 KLHL7Q8IXQ5 586 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 RPRMLQ8N4K4 120 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 MARVELD2Q8N4S9 558 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 FAM47BQ8NA70 645 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 GABPB2Q8TAK5 448 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 ATL1Q8WXF7 558 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 CCT6BQ92526 530 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 SLCO2A1Q92959 643 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 SDCCAG3Q96C92 435 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 CAPZA3Q96KX2 299 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 CSF3RQ99062 836 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 NAT9Q9BTE0 207 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 DEFB126Q9BYW3 111 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 TRIM45Q9H8W5 580 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 LIN28AQ9H9Z2 209 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 PNO1Q9NRX1 252 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 CORO1CQ9ULV4 474 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 HRH3Q9Y5N1 445 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 C2CD3Q4AC94 2353 aa11.29□□□□□ -0.6
SOX2-OT-228ENST00000597828 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 A0A1B0GTH9 108 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 A0A1W2PRS3 328 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 PINLYPA6NC86 204 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 NCF1BA6NI72 391 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 NCF1CA8MVU1 366 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 FCHO1O14526 889 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 ITGA10O75578 1167 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 TBX6O95947 436 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 TPOP07202 933 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 SERPINA6P08185 405 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 NCF1P14598 390 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 TRHRP34981 398 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 TAS2R39P59534 338 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 BTN3A2P78410 334 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 SLBPQ14493 270 aaKnown RBP eCLIP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 CMPK2Q5EBM0 449 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 NIPAL1Q6NVV3 410 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 CAPN12Q6ZSI9 719 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 CLNKQ7Z7G1 428 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 ZC3HC1Q86WB0 502 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 SCUBE1Q8IWY4 988 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 PDIK1LQ8N165 341 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 CYP4Z2PQ8N1L4 340 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 TRPV3Q8NET8 790 aa11.28□□□□□ -0.6
SOX2-OT-228ENST00000597828 B3GNT7Q8NFL0 401 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms