RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZNF385CQ66K41 422 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-202ENST00000595242 ZNF324BQ6AW86 544 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-202ENST00000595242 ARMC6Q6NXE6 501 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 GFRALQ6UXV0 394 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 CYHR1Q6ZMK1 362 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 PPP1R32Q7Z5V6 425 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 OOSP2Q86WS3 158 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 CLYBLQ8N0X4 340 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 CARFQ8N187 725 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 PDPRQ8NCN5 879 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 LKAAEAR1Q8TD35 194 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 AGAP11Q8TF27 550 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 AGAP4Q96P64 663 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 PANX3Q96QZ0 392 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 SHCBP1LQ9BZQ2 653 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 SERTAD3Q9UJW9 196 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 PCTPQ9UKL6 214 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 PRSS21Q9Y6M0 314 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 SLC9B1P1A6NJY1 282 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 A8MUI8 341 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 ZNF749O43361 778 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 MTX2O75431 263 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 SIX3O95343 332 aaPredicted RBP12.21□□□□□ -0.45
SCAF1-202ENST00000595242 VCLP18206 1134 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 UGT1A6P19224 532 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 UGT1A1P22309 533 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 UGT1A4P22310 534 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 PIK3R1P27986 724 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 EEF1DP29692 281 aaKnown RBP12.21□□□□□ -0.45
SCAF1-202ENST00000595242 CA7P43166 264 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 KIR3DL1P43629 444 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 CPA2P48052 419 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 PREPP48147 710 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 CLCQ05315 142 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 PCBP2Q15366 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
SCAF1-202ENST00000595242 TGFBIQ15582 683 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 RPE65Q16518 533 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 RPUSD3Q6P087 351 aaKnown RBP12.21□□□□□ -0.45
SCAF1-202ENST00000595242 METTL2BQ6P1Q9 378 aaKnown RBP12.21□□□□□ -0.45
SCAF1-202ENST00000595242 SBSNQ6UWP8 590 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 C11orf96Q7Z7L8 435 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 GPSM1Q86YR5 675 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 CATSPER1Q8NEC5 780 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 FBXO27Q8NI29 283 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 RP9Q8TA86 221 aaKnown RBP12.21□□□□□ -0.45
SCAF1-202ENST00000595242 UBTD2Q8WUN7 234 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 EXT2Q93063 718 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 GLYATL1Q969I3 302 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 MCUR1Q96AQ8 359 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 FAM136AQ96C01 138 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 MAGEB10Q96LZ2 347 aaPredicted RBP12.21□□□□□ -0.45
SCAF1-202ENST00000595242 COPS8Q99627 209 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 C17orf62Q9BQA9 187 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 ZSCAN5AQ9BUG6 496 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 BAIAP2L1Q9UHR4 511 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 GPN3Q9UHW5 284 aaPredicted RBP12.21□□□□□ -0.45
SCAF1-202ENST00000595242 SH3BGRL2Q9UJC5 107 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 PSMD13Q9UNM6 376 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 OARD1Q9Y530 152 aa12.21□□□□□ -0.45
SCAF1-202ENST00000595242 HCFC1P51610 2035 aa12.21□□□□□ -0.46
SCAF1-202ENST00000595242 INTS1Q8N201 2190 aaKnown RBP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 OR6C74A6NCV1 312 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 IQCF5A8MTL0 148 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 E7EQ34 232 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 AZIN1O14977 448 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 PEX11AO75192 247 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 MLYCDO95822 493 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 HBQ1P09105 142 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 ENO3P13929 434 aaPredicted RBP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 CCND1P24385 295 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 PGM1P36871 562 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 MRPL19P49406 292 aaKnown RBP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 FOXL2P58012 376 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 Q0VFX4 171 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 TTLL9Q3SXZ7 439 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 ATP13A5Q4VNC0 1218 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 KHDC1Q4VXA5 237 aaKnown RBP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 CDKL4Q5MAI5 379 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 PRAMEF13Q5VWM6 474 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 LARP4Q71RC2 724 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 RPS27LQ71UM5 84 aaKnown RBP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 HOMEZQ8IX15 550 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 MYO1HQ8N1T3 1032 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 TRAM1L1Q8N609 369 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 OR2Y1Q8NGV0 311 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 NR4A3Q92570 626 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 MTFMTQ96DP5 389 aaKnown RBP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 VPS35Q96QK1 796 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 DENND2DQ9H6A0 471 aaPredicted RBP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 EPS8L2Q9H6S3 715 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 ZBTB26Q9HCK0 441 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 TMPRSS11EQ9UL52 423 aa12.2□□□□□ -0.46
SCAF1-202ENST00000595242 TNPO3Q9Y5L0 923 aaKnown RBP12.2□□□□□ -0.46
SCAF1-202ENST00000595242 CPAMD8Q8IZJ3 1885 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 AKAP6Q13023 2319 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 FAM221AA4D161 298 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 LRRC14BA6NHZ5 514 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 ALOX12BO75342 701 aa12.19□□□□□ -0.46
SCAF1-202ENST00000595242 SKAP2O75563 359 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms