RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 HPDP32754 393 aaPredicted RBP22.01■■□□□ 1.11
LSM4-204ENST00000594828 KCNC1P48547 511 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 ST13P50502 369 aaKnown RBP22.01■■□□□ 1.11
LSM4-204ENST00000594828 PER3P56645 1201 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 SLMAPQ14BN4 828 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 PDK4Q16654 411 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 XKR6Q5GH73 641 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 RPS19BP1Q86WX3 136 aaKnown RBP22.01■■□□□ 1.11
LSM4-204ENST00000594828 EXT2Q93063 718 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 PTCD3Q96EY7 689 aaKnown RBP22.01■■□□□ 1.11
LSM4-204ENST00000594828 SIGLEC12Q96PQ1 595 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 NPLQ9BXD5 320 aaPredicted RBP22.01■■□□□ 1.11
LSM4-204ENST00000594828 CDCP1Q9H5V8 836 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 NECTIN3Q9NQS3 549 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 PCDHGB6Q9Y5F9 930 aa22.01■■□□□ 1.11
LSM4-204ENST00000594828 UTP20O75691 2785 aaKnown RBP22.01■■□□□ 1.11
LSM4-204ENST00000594828 A0A088AWK7 358 aa22■■□□□ 1.11
LSM4-204ENST00000594828 IGKV3D-11A0A0A0MRZ8 115 aa22■■□□□ 1.11
LSM4-204ENST00000594828 GABRR3A8MPY1 467 aa22■■□□□ 1.11
LSM4-204ENST00000594828 CCNT2O60583 730 aaKnown RBP22■■□□□ 1.11
LSM4-204ENST00000594828 PRAMEF4O60810 478 aa22■■□□□ 1.11
LSM4-204ENST00000594828 STSP08842 583 aa22■■□□□ 1.11
LSM4-204ENST00000594828 ZNF10P21506 573 aaPredicted RBP22■■□□□ 1.11
LSM4-204ENST00000594828 CRABP2P29373 138 aa22■■□□□ 1.11
LSM4-204ENST00000594828 GMPRP36959 345 aa22■■□□□ 1.11
LSM4-204ENST00000594828 KCNK10P57789 538 aa22■■□□□ 1.11
LSM4-204ENST00000594828 SLC7A5Q01650 507 aa22■■□□□ 1.11
LSM4-204ENST00000594828 CKAP4Q07065 602 aaKnown RBP22■■□□□ 1.11
LSM4-204ENST00000594828 NAB1Q13506 487 aa22■■□□□ 1.11
LSM4-204ENST00000594828 RUNX2Q13950 521 aa22■■□□□ 1.11
LSM4-204ENST00000594828 DOC2AQ14183 400 aa22■■□□□ 1.11
LSM4-204ENST00000594828 OR1C1Q15619 314 aa22■■□□□ 1.11
LSM4-204ENST00000594828 PRAMEF9Q5VWM5 478 aa22■■□□□ 1.11
LSM4-204ENST00000594828 GFRALQ6UXV0 394 aa22■■□□□ 1.11
LSM4-204ENST00000594828 CMC1Q7Z7K0 106 aa22■■□□□ 1.11
LSM4-204ENST00000594828 TBC1D1Q86TI0 1168 aaPredicted RBP22■■□□□ 1.11
LSM4-204ENST00000594828 ISCA2Q86U28 154 aa22■■□□□ 1.11
LSM4-204ENST00000594828 LGI4Q8N135 537 aa22■■□□□ 1.11
LSM4-204ENST00000594828 KIF2BQ8N4N8 673 aa22■■□□□ 1.11
LSM4-204ENST00000594828 MDS2Q8NDY4 140 aa22■■□□□ 1.11
LSM4-204ENST00000594828 WDR34Q96EX3 536 aa22■■□□□ 1.11
LSM4-204ENST00000594828 REXO4Q9GZR2 422 aaKnown RBP22■■□□□ 1.11
LSM4-204ENST00000594828 ALG9Q9H6U8 611 aa22■■□□□ 1.11
LSM4-204ENST00000594828 NMRAL1Q9HBL8 299 aa22■■□□□ 1.11
LSM4-204ENST00000594828 ZNF490Q9ULM2 529 aaPredicted RBP22■■□□□ 1.11
LSM4-204ENST00000594828 MMACHCQ9Y4U1 282 aa22■■□□□ 1.11
LSM4-204ENST00000594828 A0A1B0GUH1 482 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 ESYT3A0FGR9 886 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 SAGE2PA6NJ88 616 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 A8MUA0 341 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 B3GALT2O43825 422 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 SLC35E2BP0CK96 405 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 CD46P15529 392 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 TFEBP19484 476 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 MST1P26927 711 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 PLA2G16P53816 162 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 PMP22Q01453 160 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 OC90Q02509 493 aaPredicted RBP21.99■■□□□ 1.11
LSM4-204ENST00000594828 GUCY2DQ02846 1103 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 SRSF11Q05519 484 aaKnown RBP21.99■■□□□ 1.11
LSM4-204ENST00000594828 LAPTM5Q13571 262 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 SPINK14Q6IE38 97 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 TRIM40Q6P9F5 258 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 VN1R5Q7Z5H4 357 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 OR2L5Q8NG80 312 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 LRRC1Q9BTT6 524 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 EFCAB11Q9BUY7 163 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 CD244Q9BZW8 370 aa21.99■■□□□ 1.11
LSM4-204ENST00000594828 POLEQ07864 2286 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 UNC5CO95185 931 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 TBX6O95947 436 aaPredicted RBP21.98■■□□□ 1.11
LSM4-204ENST00000594828 IRF8Q02556 426 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 DLG1Q12959 904 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 EFTUD2Q15029 972 aaKnown RBP eCLIP21.98■■□□□ 1.112e-11■■■■■ 29.6
LSM4-204ENST00000594828 HIST2H2ACQ16777 129 aaPredicted RBP21.98■■□□□ 1.11
LSM4-204ENST00000594828 ADPRMQ3LIE5 342 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 PAGE2BQ5JRK9 111 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 HIST2H2AA3Q6FI13 130 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 C8orf74Q6P047 294 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 HORMAD2Q8N7B1 307 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 NFAM1Q8NET5 270 aaPredicted RBP21.98■■□□□ 1.11
LSM4-204ENST00000594828 QRFPRQ96P65 431 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 KLHL1Q9NR64 748 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 NUDT4Q9NZJ9 180 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 SEC14L3Q9UDX4 400 aa21.98■■□□□ 1.11
LSM4-204ENST00000594828 SPTBN1Q01082 2364 aaKnown RBP21.97■■□□□ 1.11
LSM4-204ENST00000594828 SPTAN1Q13813 2472 aaKnown RBP21.97■■□□□ 1.11
LSM4-204ENST00000594828 CLDN4O14493 209 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 CDK2AP1O14519 115 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 LTA4HP09960 611 aaKnown RBP21.97■■□□□ 1.11
LSM4-204ENST00000594828 CD22P20273 847 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 COL8A1P27658 744 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 EEF1DP29692 281 aaKnown RBP21.97■■□□□ 1.11
LSM4-204ENST00000594828 RAB38P57729 211 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 TGM3Q08188 693 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 CHIT1Q13231 466 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 TBCCQ15814 346 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 ADNP2Q6IQ32 1131 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 ABHD17CQ6PCB6 329 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 LRRC70Q7Z2Q7 622 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms