RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PRRG2O14669 202 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 TERF2Q15554 542 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 TOR1AIP1Q5JTV8 583 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 NCCRP1Q6ZVX7 275 aaPredicted RBP22.35■■□□□ 1.17
LSM4-202ENST00000593564 FGD2Q7Z6J4 655 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 EID3Q8N140 333 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 NKAPQ8N5F7 415 aaKnown RBP22.35■■□□□ 1.17
LSM4-202ENST00000593564 APCDD1LQ8NCL9 501 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 DMRTA2Q96SC8 542 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 VKORC1Q9BQB6 163 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 AICDAQ9GZX7 198 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 AKAP9Q99996 3911 aa22.35■■□□□ 1.17
LSM4-202ENST00000593564 NPEPPSL1A6NEC2 478 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 A8MUA0 341 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 ADAM10O14672 748 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 ZNHIT1O43257 154 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 SSTR2P30874 369 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 HNMTP50135 292 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 STXBP1P61764 594 aaKnown RBP22.34■■□□□ 1.17
LSM4-202ENST00000593564 B3GNT7Q8NFL0 401 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 GAL3ST3Q96A11 431 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 OARD1Q9Y530 152 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 PSAT1Q9Y617 370 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 F8P00451 2351 aa22.34■■□□□ 1.17
LSM4-202ENST00000593564 MYO1DO94832 1006 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 PTGER1P34995 402 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 KIR3DL1P43629 444 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 MEOX1P50221 254 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 CLCN2P51788 898 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 SYDE1Q6ZW31 735 aaPredicted RBP22.33■■□□□ 1.17
LSM4-202ENST00000593564 ZC3HC1Q86WB0 502 aaKnown RBP22.33■■□□□ 1.17
LSM4-202ENST00000593564 SCUBE1Q8IWY4 988 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.33■■□□□ 1.17
LSM4-202ENST00000593564 KLHDC8AQ8IYD2 350 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 TTLQ8NG68 377 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 EGFL8Q99944 293 aa22.33■■□□□ 1.17
LSM4-202ENST00000593564 PPIEQ9UNP9 301 aaKnown RBP22.33■■□□□ 1.17
LSM4-202ENST00000593564 TRBV11-1A0A0K0K1C0 115 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 KLRC4-KLRK1H3BQV0 150 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 TFECO14948 347 aaPredicted RBP22.32■■□□□ 1.16
LSM4-202ENST00000593564 GNAZP19086 355 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 SAT1P21673 171 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 BTN3A2P78410 334 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 MGAT5Q09328 741 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 SLCO4C1Q6ZQN7 724 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 SULF2Q8IWU5 870 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 PDLIM2Q96JY6 352 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 FAR2Q96K12 515 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 SPOCK3Q9BQ16 436 aa22.32■■□□□ 1.16
LSM4-202ENST00000593564 NPLQ9BXD5 320 aaPredicted RBP22.32■■□□□ 1.16
LSM4-202ENST00000593564 FAM95CA0A1B0GW59 222 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 H2AFYO75367 372 aaKnown RBP22.31■■□□□ 1.16
LSM4-202ENST00000593564 WDR47O94967 919 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 C1GALT1C1LP0DN25 315 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 TCP1P17987 556 aaKnown RBP22.31■■□□□ 1.16
LSM4-202ENST00000593564 GSTM2P28161 218 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 SLC6A12P48065 614 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 ARL4CP56559 192 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 ZNF460Q14592 562 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 TMIGD1Q6UXZ0 262 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 C3P1Q6ZMU1 363 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 ADAMTSL2Q86TH1 951 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 CYP4Z2PQ8N1L4 340 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 TMEM156Q8N614 296 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 ACBD4Q8NC06 268 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 MS4A6EQ96DS6 147 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 VMP1Q96GC9 406 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 ZNF223Q9UK11 482 aaPredicted RBP22.31■■□□□ 1.16
LSM4-202ENST00000593564 PPT2Q9UMR5 302 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 CLDN16Q9Y5I7 305 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 CELSR1Q9NYQ6 3014 aa22.31■■□□□ 1.16
LSM4-202ENST00000593564 ANKRD17O75179 2603 aaKnown RBP22.3■■□□□ 1.16
LSM4-202ENST00000593564 LRIT2A6NDA9 550 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 ZSCAN12O43309 604 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 PEX1O43933 1283 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 ITGA10O75578 1167 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 HNRNPH1P31943 449 aaKnown RBP22.3■■□□□ 1.16
LSM4-202ENST00000593564 PTGS2P35354 604 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 GPR143P51810 404 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 HSD17B7P56937 341 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 TAS2R39P59534 338 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 RUNX2Q13950 521 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 TSNQ15631 228 aaKnown RBP22.3■■□□□ 1.16
LSM4-202ENST00000593564 ZFP62Q8NB50 900 aaPredicted RBP22.3■■□□□ 1.16
LSM4-202ENST00000593564 C16orf52Q8NHV5 167 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 FAM57AQ8TBR7 257 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 ANKRD49Q8WVL7 239 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 RHBDF1Q96CC6 855 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 C14orf79Q96F83 325 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 SEC16BQ96JE7 1060 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 PNO1Q9NRX1 252 aaKnown RBP22.3■■□□□ 1.16
LSM4-202ENST00000593564 MOCS1Q9NZB8 636 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 CTNNAL1Q9UBT7 734 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 FBXW2Q9UKT8 454 aa22.3■■□□□ 1.16
LSM4-202ENST00000593564 A0A1B0GTH9 108 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 ERI3O43414 337 aaKnown RBP22.29■■□□□ 1.16
LSM4-202ENST00000593564 TFEBP19484 476 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 RFC3P40938 356 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 GDF5P43026 501 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 RAB38P57729 211 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms