RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SFT2D3Q587I9 215 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 CDKL4Q5MAI5 379 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 ABHD17BQ5VST6 288 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 PAPD4Q6PIY7 484 aaKnown RBP12.4□□□□□ -0.42
H3F3B-213ENST00000593254 ZDHHC24Q6UX98 284 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 SLCO4C1Q6ZQN7 724 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 SPATA6LQ8N4H0 392 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 BCORP1Q8N888 145 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 M1APQ8TC57 530 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 TSLPQ969D9 159 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 SMIM10Q96HG1 83 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 UBXN10Q96LJ8 280 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 TAAR6Q96RI8 345 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 LPAR4Q99677 370 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 TMEM79Q9BSE2 394 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 AICDAQ9GZX7 198 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 OLAHQ9NV23 265 aa12.4□□□□□ -0.42
H3F3B-213ENST00000593254 FBN3Q75N90 2809 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 OR5H15A6NDH6 313 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 TAPBPO15533 448 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 SNRPB2P08579 225 aaKnown RBP12.39□□□□□ -0.43
H3F3B-213ENST00000593254 C1GALT1C1LP0DN25 315 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 COX6B1P14854 86 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 SPRP35270 261 aaPredicted RBP12.39□□□□□ -0.43
H3F3B-213ENST00000593254 HNF4AP41235 474 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 MAGEA4P43358 317 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 RAB8AP61006 207 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 RAB10P61026 200 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 ATP6V0D1P61421 351 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 OR4D1Q15615 310 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 KBTBD12Q3ZCT8 623 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 TMIGD1Q6UXZ0 262 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 QSOX2Q6ZRP7 698 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 CCDC25Q86WR0 208 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 GPSM1Q86YR5 675 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 CTAGE3PQ8IX95 158 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.39□□□□□ -0.434e-7■□□□□ 9.7
H3F3B-213ENST00000593254 TCAIMQ8N3R3 496 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 ZNF808Q8N4W9 903 aaPredicted RBP12.39□□□□□ -0.43
H3F3B-213ENST00000593254 TTLQ8NG68 377 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 CCDC120Q96HB5 630 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 CAPS2Q9BXY5 557 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 PITHD1Q9GZP4 211 aaPredicted RBP12.39□□□□□ -0.43
H3F3B-213ENST00000593254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.39□□□□□ -0.43
H3F3B-213ENST00000593254 EHD1Q9H4M9 534 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 KLHL31Q9H511 634 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 CNOT10Q9H9A5 744 aaKnown RBP12.39□□□□□ -0.43
H3F3B-213ENST00000593254 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 STMN3Q9NZ72 180 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 GPRC5BQ9NZH0 403 aa12.39□□□□□ -0.43
H3F3B-213ENST00000593254 A8MUI8 341 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 B4GALT2O60909 372 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 H2AFYO75367 372 aaKnown RBP12.38□□□□□ -0.43
H3F3B-213ENST00000593254 RNH1P13489 461 aaKnown RBP12.38□□□□□ -0.43
H3F3B-213ENST00000593254 GSTM2P28161 218 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 STX2P32856 288 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 KCNK10P57789 538 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 OR4D2P58180 307 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 STXBP1P61764 594 aaKnown RBP12.38□□□□□ -0.43
H3F3B-213ENST00000593254 GUCY2DQ02846 1103 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 ACTN3Q08043 901 aaPredicted RBP12.38□□□□□ -0.43
H3F3B-213ENST00000593254 SLBPQ14493 270 aaKnown RBP eCLIP12.38□□□□□ -0.43
H3F3B-213ENST00000593254 TOR1AIP1Q5JTV8 583 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 ACER2Q5QJU3 275 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 GRTP1Q5TC63 336 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 FCRLBQ6BAA4 426 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 SULT1C3Q6IMI6 304 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 MRGPRGQ86SM5 289 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 KRT78Q8N1N4 520 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 PPM1NQ8N819 430 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 PDPRQ8NCN5 879 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 FBF1Q8TES7 1133 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 NR4A3Q92570 626 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 GAL3ST3Q96A11 431 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 KIAA1191Q96A73 305 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 SEC16BQ96JE7 1060 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 ZNF354BQ96LW1 612 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 MAGEB10Q96LZ2 347 aaPredicted RBP12.38□□□□□ -0.43
H3F3B-213ENST00000593254 NPAS2Q99743 824 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 NT5DC2Q9H857 520 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 KCNK13Q9HB14 408 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 WWOXQ9NZC7 414 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 GTF3C1Q12789 2109 aa12.38□□□□□ -0.43
H3F3B-213ENST00000593254 ACANP16112 2415 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 IGKV3D-11A0A0A0MRZ8 115 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 PRMT3O60678 531 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 PRAMEF4O60810 478 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 PRAMEF2O60811 474 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 STK16O75716 305 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 FAM155BO75949 473 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 TBX6O95947 436 aaPredicted RBP12.37□□□□□ -0.43
H3F3B-213ENST00000593254 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 HNRNPH1P31943 449 aaKnown RBP12.37□□□□□ -0.43
H3F3B-213ENST00000593254 HSPA7P48741 367 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 SLC26A5P58743 744 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 BTG2P78543 158 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 NAB1Q13506 487 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 MEP1AQ16819 746 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 ADPRMQ3LIE5 342 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms