RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ITGAXP20702 1163 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 CDH3P22223 829 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 ALDH4A1P30038 563 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 BSGP35613 385 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 GRK6P43250 576 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 GSTM5P46439 218 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 NUDT2P50583 147 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 RAP1GDS1P52306 607 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 CLDN6P56747 220 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 PPP1CAP62136 330 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 KCNJ2P63252 427 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 SLC25A3Q00325 362 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 RGS1Q08116 209 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 TGM3Q08188 693 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 ZNF763Q0D2J5 394 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 C19orf57Q0VDD7 668 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 HYAL2Q12891 473 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 TLR1Q15399 786 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 NR0B2Q15466 257 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 DPY19L1Q2PZI1 675 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 VPS26BQ4G0F5 336 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 MANEAQ5SRI9 462 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 REP15Q6BDI9 236 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 IRGCQ6NXR0 463 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 C16orf89Q6UX73 402 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 RNF44Q7L0R7 432 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 UBE3DQ7Z6J8 389 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 DSELQ8IZU8 1212 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 CARFQ8N187 725 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 KRTCAP2Q8N6L1 136 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 WDR48Q8TAF3 677 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.82□□□□□ -0.36
VMP1-217ENST00000593168 TESCQ96BS2 214 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 ROPN1LQ96C74 230 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 MS4A6EQ96DS6 147 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 ZDHHC12Q96GR4 267 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 EGLN2Q96KS0 407 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 PPM1MQ96MI6 270 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 RAB3IPQ96QF0 476 aaPredicted RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 NPAS2Q99743 824 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 EBPLQ9BY08 206 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 ZNF717Q9BY31 904 aaPredicted RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 CADM1Q9BY67 442 aaKnown RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 SLC6A16Q9GZN6 736 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 REXO4Q9GZR2 422 aaKnown RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 CHRNA10Q9GZZ6 450 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 DDX31Q9H8H2 851 aaKnown RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 SYNPO2LQ9H987 977 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 LEF1Q9UJU2 399 aaPredicted RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 ASXL3Q9C0F0 2248 aa12.82□□□□□ -0.36
VMP1-217ENST00000593168 MDC1Q14676 2089 aaKnown RBP12.82□□□□□ -0.36
VMP1-217ENST00000593168 FLNBO75369 2602 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 A0A0J9YVX5 310 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 GNG14A0A1W2PPG7 69 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 EME2A4GXA9 379 aaPredicted RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 TLCD2A6NGC4 264 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 C9JVG2 144 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 CAPN5O15484 640 aaPredicted RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 SIGLEC6O43699 453 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 TLX3O43711 291 aaPredicted RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 DUX1O43812 170 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 KLHL18O94889 574 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 NPPAP01160 153 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 ST6GAL1P15907 406 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 TPP2P29144 1249 aaPredicted RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 HNRNPH1P31943 449 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 RPL3P39023 403 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 TSFMP43897 325 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 OR1D5P58170 312 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 STXBP1P61764 594 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 SRSF11Q05519 484 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 SQSTM1Q13501 440 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 ZC3H12BQ5HYM0 836 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 OR4C11Q6IEV9 310 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 RETREG3Q86VR2 466 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 NUDT13Q86X67 352 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 PGAM4Q8N0Y7 254 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 ARHGAP24Q8N264 748 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 DPP10Q8N608 796 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 C19orf47Q8N9M1 422 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 CAMKVQ8NCB2 501 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 OR2L5Q8NG80 312 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 CLHC1Q8NHS4 586 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 C16orf78Q8WTQ4 265 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 NCSTNQ92542 709 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 TCTN2Q96GX1 697 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 AHCYL2Q96HN2 611 aaKnown RBP12.81□□□□□ -0.36
VMP1-217ENST00000593168 MAP3K3Q99759 626 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 TBCDQ9BTW9 1192 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 AICDAQ9GZX7 198 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 KLHL25Q9H0H3 589 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 PRORYQ9H606 182 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 MYNNQ9NPC7 610 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 LHX9Q9NQ69 397 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 MAP10Q9P2G4 905 aa12.81□□□□□ -0.36
VMP1-217ENST00000593168 TENM4Q6N022 2769 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 URADA6NGE7 173 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 SLC9B1P1A6NJY1 282 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 ATXN7O15265 892 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms