RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 CAB39LQ9H9S4 337 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 WWOXQ9NZC7 414 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 TXNDC16Q9P2K2 825 aa16.79■□□□□ 0.28
CIRBP-243ENST00000593128 ERI3O43414 337 aaKnown RBP16.78■□□□□ 0.28
CIRBP-243ENST00000593128 SERPINA6P08185 405 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 ZNF24P17028 368 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 RFC3P40938 356 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 PLA2G16P53816 162 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 MLF1P58340 268 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 CDKL1Q00532 357 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 SLC13A2Q13183 592 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 FRG1Q14331 258 aaKnown RBP16.78■□□□□ 0.28
CIRBP-243ENST00000593128 KRTCAP3Q53RY4 240 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 TMIGD1Q6UXZ0 262 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 C3P1Q6ZMU1 363 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 NCCRP1Q6ZVX7 275 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-243ENST00000593128 SPPL2CQ8IUH8 684 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 LGI4Q8N135 537 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 KRT78Q8N1N4 520 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 FAM47BQ8NA70 645 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 PYROXD1Q8WU10 500 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 AICDAQ9GZX7 198 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 RHOJQ9H4E5 214 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 SAYSD1Q9NPB0 183 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 NSMCE4AQ9NXX6 385 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 MYO9AB2RTY4 2548 aa16.78■□□□□ 0.28
CIRBP-243ENST00000593128 TCRBV16S1A1N1A0A5B0 115 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 ASPDHA6ND91 283 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 CCDC188H7C350 402 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 PHGDHO43175 533 aaKnown RBP16.77■□□□□ 0.28
CIRBP-243ENST00000593128 ASNA1O43681 348 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 NME2P1O60361 137 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 SMIM10L1P0DMW3 83 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 COX6B1P14854 86 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 NME2P22392 152 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 PPP2R1BP30154 601 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 HNRNPH1P31943 449 aaKnown RBP16.77■□□□□ 0.28
CIRBP-243ENST00000593128 SMSP52788 366 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 ADORA2A-AS1P86434 159 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 BNC2Q6ZN30 1099 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-243ENST00000593128 SLCO4C1Q6ZQN7 724 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 CLNKQ7Z7G1 428 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 KLHDC8AQ8IYD2 350 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 GAL3ST3Q96A11 431 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 ESAMQ96AP7 390 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 RHBDF1Q96CC6 855 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 SMIM10Q96HG1 83 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 COPS7BQ9H9Q2 264 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-243ENST00000593128 PRTFDC1Q9NRG1 225 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 SMYD2Q9NRG4 433 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 MOCS1Q9NZB8 636 aa16.77■□□□□ 0.28
CIRBP-243ENST00000593128 MTO1Q9Y2Z2 717 aaKnown RBP16.77■□□□□ 0.28
CIRBP-243ENST00000593128 KLF2Q9Y5W3 355 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-243ENST00000593128 CREBBPQ92793 2442 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 MYOCOSA0A1B0GUC4 107 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 ANKDD1BA6NHY2 528 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 B3GALT2O43825 422 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 CDC40O60508 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
CIRBP-243ENST00000593128 CCDC166P0CW27 439 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 SSTR1P30872 391 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 HSPA7P48741 367 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 MEOX1P50221 254 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 CLCN2P51788 898 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 CALCOCO2Q13137 446 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 RUNX2Q13950 521 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 TGFBIQ15582 683 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 GPSM1Q86YR5 675 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 GHDCQ8N2G8 530 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 TMEM156Q8N614 296 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 NFAM1Q8NET5 270 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-243ENST00000593128 B3GNT7Q8NFL0 401 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 TTLQ8NG68 377 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 ANKRD7Q92527 254 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 MS4A6EQ96DS6 147 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 CLK4Q9HAZ1 481 aaKnown RBP16.76■□□□□ 0.27
CIRBP-243ENST00000593128 CHST11Q9NPF2 352 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 CD274Q9NZQ7 290 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 MMACHCQ9Y4U1 282 aa16.76■□□□□ 0.27
CIRBP-243ENST00000593128 LRBAP50851 2863 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 A0A088AWK7 358 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 IGKV3D-11A0A0A0MRZ8 115 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 CXorf49A8MYA2 514 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-243ENST00000593128 E7ESA3 106 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 CLDN4O14493 209 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 TFECO14948 347 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-243ENST00000593128 TP73O15350 636 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 S100BP04271 92 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-243ENST00000593128 IFNA16P05015 189 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 ZNF10P21506 573 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-243ENST00000593128 SLC6A12P48065 614 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 HLCSP50747 726 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 POU4F1Q01851 419 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 XKR6Q5GH73 641 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 RNFT1Q5M7Z0 435 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 ADNP2Q6IQ32 1131 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 TRIM40Q6P9F5 258 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 XKRXQ6PP77 449 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 CYP4Z2PQ8N1L4 340 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 BBOF1Q8ND07 529 aa16.75■□□□□ 0.27
CIRBP-243ENST00000593128 AGAP11Q8TF27 550 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms