RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TMEM178AQ8NBL3 297 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 FBXO15Q8NCQ5 510 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 THAP3Q8WTV1 239 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 LPGAT1Q92604 370 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 BIRC8Q96P09 236 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 OR2A5Q96R48 311 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 UTP23Q9BRU9 249 aaKnown RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 TMEM109Q9BVC6 243 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 PCBD2Q9H0N5 130 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 STOX2Q9P2F5 926 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 PPT2Q9UMR5 302 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 RUVBL2Q9Y230 463 aaKnown RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 CRYL1Q9Y2S2 319 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 COMMD10Q9Y6G5 202 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 KCNE1BA0A087WTH5 132 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 FAM237BA0A1B0GVD1 139 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 PABPN1LA6NDY0 278 aaKnown RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 ARHGEF33A8MVX0 844 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 CDH16O75309 829 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 NIPSNAP2O75323 286 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 MED26O95402 600 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 NSA2O95478 260 aaKnown RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 SLC16A8O95907 504 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 F10P00742 488 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 CAPN3P20807 821 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 EEF1DP29692 281 aaKnown RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 ALDH6A1Q02252 535 aaKnown RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 ACTN3Q08043 901 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 THOC5Q13769 683 aaKnown RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 GBX1Q14549 363 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 SPANXN3Q5MJ09 141 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 ACER2Q5QJU3 275 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 KIAA0930Q6ICG6 404 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 NEPROQ6NW34 567 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 ZDHHC24Q6UX98 284 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 CCDC91Q7Z6B0 441 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 CAND1Q86VP6 1230 aaKnown RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 ZC3H7AQ8IWR0 971 aaKnown RBP8.9□□□□□ -0.98
BRCA1-226ENST00000591534 TBC1D19Q8N5T2 526 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 CAMKVQ8NCB2 501 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 LRRN4CLQ8ND94 238 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 M1APQ8TC57 530 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 MTBPQ96DY7 904 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 MFSD3Q96ES6 412 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 IMMP1LQ96LU5 166 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 SERPINB12Q96P63 405 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 PKP4Q99569 1192 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 KCNK13Q9HB14 408 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 ANKHQ9HCJ1 492 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 SAYSD1Q9NPB0 183 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 TMEM184CQ9NVA4 438 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 SH3BGRL2Q9UJC5 107 aa8.9□□□□□ -0.98
BRCA1-226ENST00000591534 PCM1Q15154 2024 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 LOC100289279A0A1B0GTE1 492 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 KRT87PA6NCN2 255 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 HMGB1P1B2RPK0 211 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-226ENST00000591534 E7ENX8 843 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 FAM227AF5H4B4 570 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 GOLGA8MH3BSY2 632 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 EIF3FO00303 357 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-226ENST00000591534 FOXS1O43638 330 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 NRP2O60462 931 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 KRT38O76015 456 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 MPC1LP0DKB6 136 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 CCND1P24385 295 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 MST1P26927 711 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 MAGEA3P43357 314 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 XCR1P46094 333 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 SERPINB9P50453 376 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 MEF2AQ02078 507 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-226ENST00000591534 TAP2Q03519 686 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 CLCQ05315 142 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 MPP2Q14168 576 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 BBS9Q3SYG4 887 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 ACSBG2Q5FVE4 666 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.89□□□□□ -0.99
BRCA1-226ENST00000591534 UGT3A1Q6NUS8 523 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 GK5Q6ZS86 529 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 C3orf62Q6ZUJ4 267 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 SPPL2CQ8IUH8 684 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 CILP2Q8IUL8 1156 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 LGI4Q8N135 537 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 GPATCH11Q8N954 259 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 OR9A4Q8NGU2 314 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 OR51Q1Q8NH59 317 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 ZNF480Q8WV37 535 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 ASB11Q8WXH4 323 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 KCNJ9Q92806 393 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 FAM136AQ96C01 138 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 LURAP1Q96LR2 239 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 GPR137Q96N19 417 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 LPAR4Q99677 370 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 MESP1Q9BRJ9 268 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 FUT8Q9BYC5 575 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 VN1R1Q9GZP7 353 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 MMP25Q9NPA2 562 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 CCDC177Q9NQR7 707 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-226ENST00000591534 ABCF3Q9NUQ8 709 aa8.89□□□□□ -0.99
BRCA1-226ENST00000591534 MAD1L1Q9Y6D9 718 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms