RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 PCNAP12004 261 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 RNH1P13489 461 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 EPB42P16452 691 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 CXCR2P25025 360 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 CNTFP26441 200 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 PPP2R1BP30154 601 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 UQCRFS1P47985 274 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 PIK3CGP48736 1102 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 ST13P50502 369 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 STXBP1P61764 594 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 VSNL1P62760 191 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 PCDH1Q08174 1060 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 TRAF3Q13114 568 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 DDX39BQ13838 428 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 PCBP2Q15366 365 aaKnown RBP eCLIP9.28□□□□□ -0.923e-6■□□□□ 9.3
PTPN2-208ENST00000589216 PLEKHN1Q494U1 663 aaPredicted RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 SFT2D3Q587I9 215 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 GRHL2Q6ISB3 625 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 KLC3Q6P597 504 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 ABHD17CQ6PCB6 329 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 IGFL3Q6UXB1 125 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 LINC00696Q6ZRV3 163 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 NDUFAF7Q7L592 441 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 CPEB2Q7Z5Q1 589 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 CUZD1Q86UP6 607 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 MYLK4Q86YV6 388 aaPredicted RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 LAS2Q8IYD9 372 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 TTLQ8NG68 377 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 OR2L5Q8NG80 312 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 OR7G3Q8NG95 312 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 OR52B6Q8NGF0 335 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 EPS8L3Q8TE67 593 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 MIB2Q96AX9 1013 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 TBC1D20Q96BZ9 403 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 PHF21BQ96EK2 531 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 SCYL1Q96KG9 808 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 CDK15Q96Q40 435 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 SORBS1Q9BX66 1292 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 REXO4Q9GZR2 422 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 NECTIN3Q9NQS3 549 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 C5AR2Q9P296 337 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 PTGFRNQ9P2B2 879 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 TBK1Q9UHD2 729 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 PCTPQ9UKL6 214 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 G3BP2Q9UN86 482 aaKnown RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 NTNG1Q9Y2I2 539 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 PCDHGB7Q9Y5F8 929 aa9.28□□□□□ -0.92
PTPN2-208ENST00000589216 V9GYY5 206 aaPredicted RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 USP9YO00507 2555 aaPredicted RBP9.28□□□□□ -0.92
PTPN2-208ENST00000589216 SVILO95425 2214 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 CCDC189A1A4V9 331 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 ANKDD1BA6NHY2 528 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 SMIM23A6NLE4 172 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 SAP18O00422 153 aaKnown RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 PPP6CO00743 305 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 MAN1A2O60476 641 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 H2AFYO75367 372 aaKnown RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 WISP1O95388 367 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 ETHE1O95571 254 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 SERPINA7P05543 415 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 CYC1P08574 325 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 RPS17P08708 135 aaKnown RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 TSPAN8P19075 237 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 GSTM2P28161 218 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 SLCO1A2P46721 670 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 GTF2H2Q13888 395 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 NSDHLQ15738 373 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 TSNAXIP1Q2TAA8 658 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 PAGE2BQ5JRK9 111 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 AGAP7PQ5VUJ5 663 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 FCRLBQ6BAA4 426 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 GTF2H2CQ6P1K8 395 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 MED27Q6P2C8 311 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 TRIM40Q6P9F5 258 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 PAPD4Q6PIY7 484 aaKnown RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 IGFL2Q6UWQ7 119 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 QSOX2Q6ZRP7 698 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 Q6ZS92 163 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 KBTBD2Q8IY47 623 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 CYP4X1Q8N118 509 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 METTL21AQ8WXB1 218 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 PNPLA2Q96AD5 504 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 C19orf60Q96EN9 201 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 AGAP4Q96P64 663 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 MTERF1Q99551 399 aaKnown RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 NPAS2Q99743 824 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 TUBB6Q9BUF5 446 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 CAPS2Q9BXY5 557 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 ZNF717Q9BY31 904 aaPredicted RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 PITHD1Q9GZP4 211 aaPredicted RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 MRPL46Q9H2W6 279 aaKnown RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 OR51B5Q9H339 312 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 IPPKQ9H8X2 491 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 ACTR8Q9H981 624 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 ZBTB26Q9HCK0 441 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 DMRT3Q9NQL9 472 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 TMEM216Q9P0N5 145 aa9.27□□□□□ -0.93
PTPN2-208ENST00000589216 PSMC3IPQ9P2W1 217 aaPredicted RBP9.27□□□□□ -0.93
PTPN2-208ENST00000589216 EMCNQ9ULC0 261 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms