RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 MAGEA5P43359 124 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 ADARP55265 1226 aaKnown RBP14.03□□□□□ -0.16
SF3A2-204ENST00000589118 RNF187Q5TA31 235 aaPredicted RBP14.03□□□□□ -0.16
SF3A2-204ENST00000589118 ZNF470Q6ECI4 717 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 ARMC10Q8N2F6 343 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 PSD4Q8NDX1 1056 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 CD200R1Q8TD46 325 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 UTP15Q8TED0 518 aaKnown RBP14.03□□□□□ -0.16
SF3A2-204ENST00000589118 EEF1AKMT1Q8WVE0 214 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 NCLNQ969V3 563 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 RMND5BQ96G75 393 aaPredicted RBP14.03□□□□□ -0.16
SF3A2-204ENST00000589118 HES6Q96HZ4 224 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 PDLIM2Q96JY6 352 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 SMC6Q96SB8 1091 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 TTTY12Q9BZ98 90 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 TSGA10Q9BZW7 698 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 AICDAQ9GZX7 198 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 DRG1Q9Y295 367 aaKnown RBP14.03□□□□□ -0.16
SF3A2-204ENST00000589118 DHRS7Q9Y394 339 aa14.03□□□□□ -0.16
SF3A2-204ENST00000589118 KIAA1549Q9HCM3 1950 aa14.02□□□□□ -0.16
SF3A2-204ENST00000589118 A0A0G2JN53 185 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 KDM4EB2RXH2 506 aaPredicted RBP14.02□□□□□ -0.17
SF3A2-204ENST00000589118 OR2J2O76002 312 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 IL10P22301 178 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 JAK1P23458 1154 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 HRH2P25021 359 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 UQCRC1P31930 480 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 KIR2DL3P43628 341 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 KCNJ1P48048 391 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 CLCN2P51788 898 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 WNT3P56703 355 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 HERC3Q15034 1050 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 TRIP13Q15645 432 aaPredicted RBP14.02□□□□□ -0.17
SF3A2-204ENST00000589118 PHKG1Q16816 387 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 TTLL9Q3SXZ7 439 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 KIAA0930Q6ICG6 404 aaPredicted RBP14.02□□□□□ -0.17
SF3A2-204ENST00000589118 B3GNT6Q6ZMB0 384 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 QSOX2Q6ZRP7 698 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 PRIMA1Q86XR5 153 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 SLC13A5Q86YT5 568 aaPredicted RBP14.02□□□□□ -0.17
SF3A2-204ENST00000589118 LRRC8AQ8IWT6 810 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 TMEM52Q8NDY8 209 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 B3GNT7Q8NFL0 401 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 OR4K3Q96R72 315 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 TIMMDC1Q9NPL8 285 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 SEMA4BQ9NPR2 832 aaPredicted RBP14.02□□□□□ -0.17
SF3A2-204ENST00000589118 DMRT3Q9NQL9 472 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 CAPN6Q9Y6Q1 641 aa14.02□□□□□ -0.17
SF3A2-204ENST00000589118 FN1P02751 2386 aaKnown RBP14.01□□□□□ -0.17
SF3A2-204ENST00000589118 ATP6AP2A0A1C7CYW4 349 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 WWP2O00308 870 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 ZNF354AO60765 605 aaPredicted RBP14.01□□□□□ -0.17
SF3A2-204ENST00000589118 ATP6AP2O75787 350 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 HAUS5O94927 633 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 TUBB4AP04350 444 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 FOSL1P15407 271 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 SOX3P41225 446 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 DNASE1L1P49184 302 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 SSR4P51571 173 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 HNRNPFP52597 415 aaKnown RBP14.01□□□□□ -0.17
SF3A2-204ENST00000589118 TIAL1Q01085 375 aaKnown RBP eCLIP14.01□□□□□ -0.17
SF3A2-204ENST00000589118 SIX1Q15475 284 aaPredicted RBP14.01□□□□□ -0.17
SF3A2-204ENST00000589118 CA13Q8N1Q1 262 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 TMEM251Q8N6I4 163 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 GOT1L1Q8NHS2 421 aaPredicted RBP14.01□□□□□ -0.17
SF3A2-204ENST00000589118 NDNQ99608 321 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 ZDHHC11Q9H8X9 412 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 PRDM9Q9NQV7 894 aa14.01□□□□□ -0.17
SF3A2-204ENST00000589118 EIF2B3Q9NR50 452 aaKnown RBP14.01□□□□□ -0.17
SF3A2-204ENST00000589118 FREM3P0C091 2139 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 PFDN6O15212 129 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 GRK3P35626 688 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 SLC1A2P43004 574 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 GPR143P51810 404 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 ANKRD22Q5VYY1 191 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 CASC4Q6P4E1 433 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 PAOXQ6QHF9 649 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 LCTLQ6UWM7 567 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 TRILQ7L0X0 811 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 ZNF321PQ8N8H1 164 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 ANKRD53Q8N9V6 530 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 ZNF669Q96BR6 464 aaPredicted RBP14□□□□□ -0.17
SF3A2-204ENST00000589118 CAPZA3Q96KX2 299 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 TSNARE1Q96NA8 513 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 ALPK1Q96QP1 1244 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 SGPP1Q9BX95 441 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 INTS10Q9NVR2 710 aaKnown RBP14□□□□□ -0.17
SF3A2-204ENST00000589118 CBLCQ9ULV8 474 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 CLDN16Q9Y5I7 305 aa14□□□□□ -0.17
SF3A2-204ENST00000589118 NSD1Q96L73 2696 aaPredicted RBP14□□□□□ -0.17
SF3A2-204ENST00000589118 A6NNC1 897 aa13.99□□□□□ -0.17
SF3A2-204ENST00000589118 A8MVJ9 347 aa13.99□□□□□ -0.17
SF3A2-204ENST00000589118 GLSO94925 669 aaPredicted RBP13.99□□□□□ -0.17
SF3A2-204ENST00000589118 VPS41P49754 854 aa13.99□□□□□ -0.17
SF3A2-204ENST00000589118 CCR8P51685 355 aa13.99□□□□□ -0.17
SF3A2-204ENST00000589118 RUNX2Q13950 521 aa13.99□□□□□ -0.17
SF3A2-204ENST00000589118 DHX34Q14147 1143 aaKnown RBP13.99□□□□□ -0.17
SF3A2-204ENST00000589118 C1orf185Q5T7R7 199 aa13.99□□□□□ -0.17
SF3A2-204ENST00000589118 SEL1L2Q5TEA6 688 aa13.99□□□□□ -0.17
SF3A2-204ENST00000589118 HECTD2Q5U5R9 776 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms