RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 TIGD2Q4W5G0 525 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 NOXRED1Q6NXP6 359 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 ZCCHC8Q6NZY4 707 aaKnown RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 GUSBP11Q6P575 273 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 R3HCC1LQ7Z5L2 792 aaKnown RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 GLRX5Q86SX6 157 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 LRRTM4Q86VH4 590 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 CARM1Q86X55 608 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 SPPL2CQ8IUH8 684 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 SDR16C5Q8N3Y7 309 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 SVOPLQ8N434 492 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 LIX1Q8N485 282 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 FAM181AQ8N9Y4 354 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 OR9A1PQ8NGU1 263 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 PNPT1Q8TCS8 783 aaKnown RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 ZDHHC1Q8WTX9 485 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 CHTF18Q8WVB6 975 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 PATE1Q8WXA2 126 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 LRTOMTQ8WZ04 291 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 COQ8BQ96D53 544 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 DGCR14Q96DF8 476 aaKnown RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 NRBF2Q96F24 287 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 ZNF764Q96H86 408 aaPredicted RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 REXO5Q96IC2 774 aaKnown RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 C1orf50Q9BV19 199 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 SGPP1Q9BX95 441 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 OSGEPL1Q9H4B0 414 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 KAT8Q9H7Z6 458 aaKnown RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 PNPLA3Q9NST1 481 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 INTS7Q9NVH2 962 aaKnown RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 AHSPQ9NZD4 102 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 STOX2Q9P2F5 926 aaPredicted RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 FAM8A1Q9UBU6 413 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 BTNL2Q9UIR0 455 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 POLR3HQ9Y535 204 aaPredicted RBP8.35□□□□□ -1.07
KDM4B-207ENST00000588961 KNL1Q8NG31 2342 aa8.35□□□□□ -1.07
KDM4B-207ENST00000588961 DMXL1Q9Y485 3027 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ARHGEF33A8MVX0 844 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 CASC3O15234 703 aaKnown RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 CLOCKO15516 846 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 NOBOXO60393 691 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 TBX19O60806 448 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 H6PDO95479 791 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 C1GALT1C1LP0DN25 315 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ERGP11308 486 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 HOXB9P17482 250 aaPredicted RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ATP6V1B2P21281 511 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 MYF6P23409 242 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ACADLP28330 430 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 MSX2P35548 267 aaPredicted RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 HALP42357 657 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 MAZP56270 477 aaKnown RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 CLDN6P56747 220 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 CYP4F3Q08477 520 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ACSM2AQ08AH3 577 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 C18orf21Q32NC0 220 aaPredicted RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 FAM174BQ3ZCQ3 159 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 KCTD21Q4G0X4 260 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 LIN52Q52LA3 116 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 FBXO48Q5FWF7 155 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 XKR6Q5GH73 641 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ZC3H12BQ5HYM0 836 aaKnown RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 PERM1Q5SV97 790 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ACSM2BQ68CK6 577 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 MED27Q6P2C8 311 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 OGFOD3Q6PK18 319 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 SLC2A7Q6PXP3 512 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 SCIMPQ6UWF3 145 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 LCTLQ6UWM7 567 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 DHRS13Q6UX07 377 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 CYP2R1Q6VVX0 501 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 IKBIPQ70UQ0 350 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 C11orf96Q7Z7L8 435 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 VRK3Q8IV63 474 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 CHERPQ8IWX8 916 aaKnown RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 NAGSQ8N159 534 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 RAB42Q8N4Z0 105 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ARL10Q8N8L6 244 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 FAM156AQ8NDB6 213 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 GPR156Q8NFN8 814 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 GOT1L1Q8NHS2 421 aaPredicted RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 IFI44Q8TCB0 444 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 SKA2Q8WVK7 121 aaPredicted RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 AURKBQ96GD4 344 aaPredicted RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 RNF145Q96MT1 663 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 THUMPD3Q9BV44 507 aaKnown RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 CHID1Q9BWS9 393 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 PRDM8Q9NQV8 689 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 DCAF13Q9NV06 445 aaKnown RBP8.34□□□□□ -1.07
KDM4B-207ENST00000588961 ATAD3AQ9NVI7 634 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 EVA1BQ9NVM1 165 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 SPATA7Q9P0W8 599 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 DNAJB9Q9UBS3 223 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 TBC1D29Q9UFV1 150 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 GIMAP2Q9UG22 337 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 PACSIN3Q9UKS6 424 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 CFAP54Q96N23 3096 aa8.34□□□□□ -1.07
KDM4B-207ENST00000588961 COL5A1P20908 1838 aaPredicted RBP8.33□□□□□ -1.08
KDM4B-207ENST00000588961 ANKRD12Q6UB98 2062 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms