RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SPCS2Q15005 226 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 ZXDCQ2QGD7 858 aaPredicted RBP13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 ARSIQ5FYB1 569 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 TMEM220Q6QAJ8 160 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 SERPINA13PQ6UXR4 307 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 CEP68Q76N32 757 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 ZNF605Q86T29 641 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 ADIPOR2Q86V24 386 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 ARMC8Q8IUR7 673 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 RASGEF1AQ8N9B8 481 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 KBTBD8Q8NFY9 601 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 HUS1BQ8NHY5 278 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 VOPP1Q96AW1 172 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 C7orf34Q96L11 122 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 CSF3RQ99062 836 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 MAPKAP1Q9BPZ7 522 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 PITHD1Q9GZP4 211 aaPredicted RBP13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 ABCG8Q9H221 673 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 MMP27Q9H306 513 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 DPP7Q9UHL4 492 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 ZNF451Q9Y4E5 1061 aa13.48□□□□□ -0.25
NEDD4L-223ENST00000588516 ISPDA4D126 451 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 SH3D21A4FU49 640 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 PRAMEF4O60810 478 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 XYLBO75191 536 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 NADKO95544 446 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 MT-ND2P03891 347 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 IMPA1P29218 277 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 CD40LGP29965 261 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 HOXA9P31269 272 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 FMO3P31513 532 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 MMP12P39900 470 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 ETV3P41162 512 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 CRATP43155 626 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 MAGEA8P43361 318 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 KCNJ10P78508 379 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 PDE7AQ13946 482 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 TBCEQ15813 527 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 TIMM50Q3ZCQ8 353 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 CRB2Q5IJ48 1285 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 PRAMEF9Q5VWM5 478 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 ASTLQ6HA08 431 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 RFLNAQ6ZTI6 216 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 SYTL1Q8IYJ3 562 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 AMER2Q8N7J2 671 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 OR9A1PQ8NGU1 263 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 SPPL3Q8TCT6 385 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 SPPL2AQ8TCT8 520 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 POF1BQ8WVV4 589 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 SCAMP4Q969E2 229 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 LINC00615Q96LM1 132 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 COPS4Q9BT78 406 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 SGPP1Q9BX95 441 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 MROQ9BYG7 248 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 PCBD2Q9H0N5 130 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 DPEP2Q9H4A9 486 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 AKIP1Q9NQ31 210 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 VNN3Q9NY84 501 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 GULP1Q9UBP9 304 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 GPR34Q9UPC5 381 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 IRAK3Q9Y616 596 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 EPG5Q9HCE0 2579 aa13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 EP300Q09472 2414 aaPredicted RBP13.47□□□□□ -0.25
NEDD4L-223ENST00000588516 FUOMA2VDF0 154 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 OR2A25A4D2G3 310 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 EFCAB10A6NFE3 127 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 OR2AG2A6NM03 316 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 TAF4O00268 1085 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 XPNPEP2O43895 674 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 VEGFDO43915 354 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 TBX19O60806 448 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 PDE9AO76083 593 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 C1orf105O95561 183 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 CD22P20273 847 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 RRM2P31350 389 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 CHI3L1P36222 383 aaPredicted RBP13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 CLK1P49759 484 aaKnown RBP13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 SMIM11AP58511 58 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 CDC42P60953 191 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 RPS13P62277 151 aaKnown RBP13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 RAE1P78406 368 aaKnown RBP13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 SEMG2Q02383 582 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 KCNC4Q03721 635 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 C2orf80Q0P641 193 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 RPA4Q13156 261 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 SCARB2Q14108 478 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 PUM1Q14671 1186 aaKnown RBP eCLIP13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 CYP2A13Q16696 494 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 MICAQ29983 383 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 LIPIQ6XZB0 460 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 USP43Q70EL4 1123 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 PAGE2Q7Z2X7 111 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 ZNF551Q7Z340 670 aaPredicted RBP13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 VTCN1Q7Z7D3 282 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 IGFN1Q86VF2 1251 aa13.46□□□□□ -0.25
NEDD4L-223ENST00000588516 UBALD2Q8IYN6 164 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms