RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PRSS41Q7RTY9 318 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 PAGE2Q7Z2X7 111 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ARHGAP22Q7Z5H3 698 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 KMT5CQ86Y97 462 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 SLITRK4Q8IW52 837 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 MMP21Q8N119 569 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 DTWD1Q8N5C7 304 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 RCBTB1Q8NDN9 531 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 VPS33AQ96AX1 596 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 TM4SF18Q96CE8 201 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 SLC7A6OSQ96CW6 309 aaPredicted RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 RCN3Q96D15 328 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 CMTM5Q96DZ9 223 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 SPDL1Q96EA4 605 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 KCNC2Q96PR1 638 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 DPYSL5Q9BPU6 564 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 TBCDQ9BTW9 1192 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 SPRTNQ9H040 489 aaPredicted RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 CLMPQ9H6B4 373 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 MYNNQ9NPC7 610 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 TXLNGQ9NUQ3 528 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ADAM29Q9UKF5 820 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ASXL3Q9C0F0 2248 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ARHGAP10A1A4S6 786 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 URADA6NGE7 173 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 H3BMH7 237 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 AGRPO00253 132 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 SCAMP2O15127 329 aaKnown RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 ZSCAN9O15535 394 aaPredicted RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 MAP3K7O43318 606 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 DNAJB6O75190 326 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 SCELO95171 688 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 IL1RNP18510 177 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 ASMTP46597 345 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 PDX1P52945 283 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 MAPK12P53778 367 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 HNRNPH2P55795 449 aaKnown RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 KCNK10P57789 538 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 C21orf58P58505 322 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 TGM3Q08188 693 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 C2orf80Q0P641 193 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 SPIDRQ14159 915 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 CLPPQ16740 277 aaPredicted RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 VPS26BQ4G0F5 336 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 DEFB134Q4QY38 66 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 TIGD2Q4W5G0 525 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 SPANXN4Q5MJ08 99 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 MANEAQ5SRI9 462 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 TMTC4Q5T4D3 741 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 MRM1Q6IN84 353 aaKnown RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 FAM71E1Q6IPT2 247 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 ANKRD26P1Q6NSI1 321 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 B3GNT8Q7Z7M8 397 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 RETREG3Q86VR2 466 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 PDSS2Q86YH6 399 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 FAM9CQ8IZT9 166 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 SHISA5Q8N114 240 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 ZCCHC7Q8N3Z6 543 aaKnown RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 ZNF655Q8N720 491 aaPredicted RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 ACOT4Q8N9L9 421 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 SRFBP1Q8NEF9 429 aaKnown RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 OR7A2PQ8NGA2 310 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 OR1L3Q8NH93 324 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 UCN3Q969E3 161 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 C10orf90Q96M02 699 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 ZBTB18Q99592 522 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 NPAS2Q99743 824 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 TUBB6Q9BUF5 446 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 SLC25A23Q9BV35 468 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 NLNQ9BYT8 704 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 COPS7BQ9H9Q2 264 aaPredicted RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 TMEM45AQ9NWC5 275 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 IRAK4Q9NWZ3 460 aa10.73□□□□□ -0.69
VMP1-207ENST00000588131 TEX10Q9NXF1 929 aaPredicted RBP10.73□□□□□ -0.69
VMP1-207ENST00000588131 GOLGA4Q13439 2230 aaKnown RBP10.72□□□□□ -0.69
VMP1-207ENST00000588131 A0A1W2PP18 115 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 HYKKA2RU49 373 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 FITM1A5D6W6 292 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 ZNF860A6NHJ4 632 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 CCDC154A6NI56 674 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 B2RBV5 119 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 TMEM150CB9EJG8 249 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 ANKRD65E5RJM6 399 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 PROB1E7EW31 1015 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 TXNDC9O14530 226 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 AIM2O14862 343 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 HYAL3O43820 417 aaPredicted RBP10.72□□□□□ -0.69
VMP1-207ENST00000588131 PRMT3O60678 531 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 ATP5HO75947 161 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 FAM58BPP0C7Q3 252 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 PIM1P11309 404 aaPredicted RBP10.72□□□□□ -0.69
VMP1-207ENST00000588131 COX7A2P14406 83 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 ALOX12P18054 663 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 PRPS1L1P21108 318 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 TSFMP43897 325 aaKnown RBP10.72□□□□□ -0.69
VMP1-207ENST00000588131 CLNS1AP54105 237 aaKnown RBP10.72□□□□□ -0.69
VMP1-207ENST00000588131 MTTPP55157 894 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 PHC1P78364 1004 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 OLR1P78380 273 aa10.72□□□□□ -0.69
VMP1-207ENST00000588131 KLC1Q07866 573 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms