RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SLC6A19Q695T7 634 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 JMJD6Q6NYC1 403 aaPredicted RBP13.96□□□□□ -0.17
ATG4D-207ENST00000587256 METTL2BQ6P1Q9 378 aaKnown RBP13.96□□□□□ -0.17
ATG4D-207ENST00000587256 TIFABQ6ZNK6 161 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 CPEB2Q7Z5Q1 589 aaKnown RBP13.96□□□□□ -0.17
ATG4D-207ENST00000587256 ANKRD37Q7Z713 158 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 LAS2Q8IYD9 372 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 CNPY4Q8N129 248 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 ZADH2Q8N4Q0 377 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 ATP6V1E2Q96A05 226 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 SMIM10Q96HG1 83 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 F2RL3Q96RI0 385 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 IPPKQ9H8X2 491 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 BAHCC1Q9P281 2608 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 TTLL8A6PVC2 850 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 ESPNB1AK53 854 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 GOLGA8RI6L899 631 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 E2F3O00716 465 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 STX16O14662 325 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 SH3BGRLO75368 114 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 SLU7O95391 586 aaKnown RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 CELA2AP08217 269 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 CERS1P27544 350 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 SLCO1A2P46721 670 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 CD97P48960 835 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 MTTPP55157 894 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 OR4D2P58180 307 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 PCDH1Q08174 1060 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 BTBD16Q32M84 506 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 SFT2D3Q587I9 215 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 LIPJQ5W064 366 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 ABHD17CQ6PCB6 329 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 LINC00696Q6ZRV3 163 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 RIPOR1Q6ZS17 1223 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 SIRT6Q8N6T7 355 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 RBMXL3Q8N7X1 1067 aaKnown RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 SRFBP1Q8NEF9 429 aaKnown RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 OR7G3Q8NG95 312 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 BRIX1Q8TDN6 353 aaKnown RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 ADAMTS18Q8TE60 1221 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 ZNF473Q8WTR7 871 aaKnown RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 PNPLA2Q96AD5 504 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 REPS1Q96D71 796 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 MAGEB10Q96LZ2 347 aaPredicted RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 PTCHD1Q96NR3 888 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 KCNC2Q96PR1 638 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 CENPKQ9BS16 269 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 NPLQ9BXD5 320 aaPredicted RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 MS4A8Q9BY19 250 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 ROGDIQ9GZN7 287 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 ILKAPQ9H0C8 392 aaPredicted RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 NOL11Q9H8H0 719 aaKnown RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 SLAMF7Q9NQ25 335 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 PTGFRNQ9P2B2 879 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 PCTPQ9UKL6 214 aa13.95□□□□□ -0.18
ATG4D-207ENST00000587256 MRPS33Q9Y291 106 aaKnown RBP13.95□□□□□ -0.18
ATG4D-207ENST00000587256 A8MT66 165 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 PRMT3O60678 531 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 UGDHO60701 494 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 SORBS2O94875 1100 aaKnown RBP13.94□□□□□ -0.18
ATG4D-207ENST00000587256 TBX6O95947 436 aaPredicted RBP13.94□□□□□ -0.18
ATG4D-207ENST00000587256 SHBGP04278 402 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 ICAM2P13598 275 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 TAC1P20366 129 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 MAOAP21397 527 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 SSR2P43308 183 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 CCNG1P51959 295 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 RAP1GDS1P52306 607 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 MLLT10P55197 1068 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 RAB38P57729 211 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 VSNL1P62760 191 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 ACTN3Q08043 901 aaPredicted RBP13.94□□□□□ -0.18
ATG4D-207ENST00000587256 CPSF6Q16630 551 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATG4D-207ENST00000587256 TMEM35AQ53FP2 167 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 CRB2Q5IJ48 1285 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 PAPD4Q6PIY7 484 aaKnown RBP13.94□□□□□ -0.18
ATG4D-207ENST00000587256 IGFL3Q6UXB1 125 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 ISLR2Q6UXK2 745 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 QSOX2Q6ZRP7 698 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 CHSY3Q70JA7 882 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 LCA5Q86VQ0 697 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 CYP4X1Q8N118 509 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 EFCAB3Q8N7B9 438 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 FAM47BQ8NA70 645 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 PLPP5Q8NEB5 264 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 ARMC2Q8NEN0 867 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 HUS1BQ8NHY5 278 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 ACMSDQ8TDX5 336 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 CMTM7Q96FZ5 175 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 CNDP1Q96KN2 507 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 QRFPRQ96P65 431 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 SERINC2Q96SA4 455 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 MTERF1Q99551 399 aaKnown RBP13.94□□□□□ -0.18
ATG4D-207ENST00000587256 LPAR4Q99677 370 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 WDR77Q9BQA1 342 aaPredicted RBP13.94□□□□□ -0.18
ATG4D-207ENST00000587256 PPCSQ9HAB8 311 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 ZBTB20Q9HC78 741 aaPredicted RBP13.94□□□□□ -0.18
ATG4D-207ENST00000587256 PRDM9Q9NQV7 894 aa13.94□□□□□ -0.18
ATG4D-207ENST00000587256 ADGRE2Q9UHX3 823 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms