RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 IL3P08700 152 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 SP9P0CG40 484 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 NR2F6P10588 404 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 DRD2P14416 443 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PNLIPP16233 465 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 DDCP20711 480 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 AVPR2P30518 371 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 GPC1P35052 558 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 CHI3L1P36222 383 aaPredicted RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 CPOXP36551 454 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 MPLP40238 635 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 AVPR1BP47901 424 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 RXRGP48443 463 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 TRPC1P48995 793 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PLA2G16P53816 162 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 MTTPP55157 894 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 EEFSECP57772 596 aaKnown RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 C21orf58P58505 322 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 TAS2R50P59544 299 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 ELF3P78545 371 aaPredicted RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 SRSF5Q13243 272 aaKnown RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 KIAA0040Q15053 153 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 CYP51A1Q16850 503 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 HLA-BQ31612 363 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 SPDYE7PQ495Y7 208 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 TCTE1Q5JU00 501 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PRAMEF9Q5VWM5 478 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 OR4F3Q6IEY1 312 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 ADNP2Q6IQ32 1131 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 BHLHB9Q6PI77 547 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 SLC23A3Q6PIS1 610 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 SLC2A7Q6PXP3 512 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 FAM92BQ6ZTR7 304 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 SZRD1Q7Z422 152 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 TRIM73Q86UV7 250 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 KMT5CQ86Y97 462 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PLD3Q8IV08 490 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 GPR135Q8IZ08 494 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 ZCCHC7Q8N3Z6 543 aaKnown RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 RNF175Q8N4F7 328 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 DPP10Q8N608 796 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 CSNK1A1LQ8N752 337 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 ANKRD53Q8N9V6 530 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 FAM13CQ8NE31 585 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 OR8J3Q8NGG0 315 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 OR8J2Q8NGG1 315 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 OR4A15Q8NGL6 344 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 OR4C6Q8NH72 309 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 DNAJB14Q8TBM8 379 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 C16orf78Q8WTQ4 265 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 NCSTNQ92542 709 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 ASB9Q96DX5 294 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 FAM120BQ96EK7 910 aaKnown RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 ZBED6CLQ96FA7 236 aaPredicted RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 TGM7Q96PF1 710 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 F2RL3Q96RI0 385 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 SERINC2Q96SA4 455 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PRRX2Q99811 253 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 KCTD14Q9BQ13 255 aaPredicted RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 THUMPD3Q9BV44 507 aaKnown RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 RAB33BQ9H082 229 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 VCX3BQ9H321 246 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 ANKHQ9HCJ1 492 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 KLHL3Q9UH77 587 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 MAGEL2Q9UJ55 1249 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PADI4Q9UM07 663 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 SLCO1B1Q9Y6L6 691 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 XIRP2A4UGR9 3374 aa5.9□□□□□ -1.47
LIG3-206ENST00000586058 IGKV1-8A0A0C4DH67 115 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 PRSS51A0A1B0GVH4 220 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 BLACEA4D250 179 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 LRIT2A6NDA9 550 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 RNASET2O00584 256 aaKnown RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 FBP2O00757 339 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 ANKRD28O15084 1053 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 PPM1DO15297 605 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 TOX3O15405 576 aaPredicted RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 SRPX2O60687 465 aaPredicted RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 ETHE1O95571 254 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 CPSF4O95639 269 aaKnown RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 KRT75O95678 551 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 GBAP04062 536 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 ABCB1P08183 1280 aaPredicted RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 FURINP09958 794 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 FAM58BPP0C7Q3 252 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 ZNF888P0CJ79 500 aaPredicted RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 HOXB6P17509 224 aaKnown RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 ALOX12P18054 663 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 TCN1P20061 433 aaPredicted RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 HIST1H1TP22492 207 aaPredicted RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 CPN2P22792 545 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 PSMA4P25789 261 aaKnown RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 TPP2P29144 1249 aaPredicted RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 PPP2R1BP30154 601 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 HNRNPH1P31943 449 aaKnown RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 HNRNPFP52597 415 aaKnown RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 DGKQP52824 942 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 VSX2P58304 361 aaPredicted RBP5.89□□□□□ -1.47
LIG3-206ENST00000586058 PLIN5Q00G26 463 aa5.89□□□□□ -1.47
LIG3-206ENST00000586058 TRAP1Q12931 704 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms