RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 RUNX2Q13950 521 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 PPP1R3AQ16821 1122 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 XKR6Q5GH73 641 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 CCDC137Q6PK04 289 aaKnown RBP18.22■□□□□ 0.51
PTBP1-208ENST00000585956 STRA8Q7Z7C7 330 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 CNTN4Q8IWV2 1026 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 LMNTD2Q8IXW0 634 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 CALML6Q8TD86 181 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 CHTF18Q8WVB6 975 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 PDLIM2Q96JY6 352 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 PRDM9Q9NQV7 894 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 PLSCR2Q9NRY7 297 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 HOMER3Q9NSC5 361 aa18.22■□□□□ 0.51
PTBP1-208ENST00000585956 PHF3Q92576 2039 aaKnown RBP18.22■□□□□ 0.51
PTBP1-208ENST00000585956 NIPBLQ6KC79 2804 aaeCLIP18.21■□□□□ 0.513e-6■■□□□ 13.4
PTBP1-208ENST00000585956 DIAPH2O60879 1101 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 TBX6O95947 436 aaPredicted RBP18.21■□□□□ 0.51
PTBP1-208ENST00000585956 CCDC175P0C221 793 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 PGAM1P18669 254 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 JAK1P23458 1154 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 RGS4P49798 205 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 TOR1AIP1Q5JTV8 583 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 HP1BP3Q5SSJ5 553 aaPredicted RBP18.21■□□□□ 0.51
PTBP1-208ENST00000585956 HECTD2Q5U5R9 776 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 TRMT10BQ6PF06 316 aaKnown RBP18.21■□□□□ 0.51
PTBP1-208ENST00000585956 SCUBE1Q8IWY4 988 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 ZFP62Q8NB50 900 aaPredicted RBP18.21■□□□□ 0.51
PTBP1-208ENST00000585956 C16orf52Q8NHV5 167 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 DEFB126Q9BYW3 111 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 FAM129AQ9BZQ8 928 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 DEFB127Q9H1M4 99 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 LIPGQ9Y5X9 500 aa18.21■□□□□ 0.51
PTBP1-208ENST00000585956 G3V3Y1 287 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 CDC7O00311 574 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 ZNF354AO60765 605 aaPredicted RBP18.2■□□□□ 0.5
PTBP1-208ENST00000585956 ITGA10O75578 1167 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 HNRNPH1P31943 449 aaKnown RBP18.2■□□□□ 0.5
PTBP1-208ENST00000585956 RGS1Q08116 209 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 ZNF460Q14592 562 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 ADNP2Q6IQ32 1131 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 LRRC8EQ6NSJ5 796 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 ABHD13Q7L211 337 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 TMPRSS11BQ86T26 416 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 THOC6Q86W42 341 aaKnown RBP18.2■□□□□ 0.5
PTBP1-208ENST00000585956 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.2■□□□□ 0.54e-10■□□□□ 11
PTBP1-208ENST00000585956 CYP4Z2PQ8N1L4 340 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 ZNF321PQ8N8H1 164 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 KCMF1Q9P0J7 381 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 TNFRSF10DQ9UBN6 386 aa18.2■□□□□ 0.5
PTBP1-208ENST00000585956 KLF13Q9Y2Y9 288 aaPredicted RBP18.2■□□□□ 0.5
PTBP1-208ENST00000585956 PRRC2AP48634 2157 aaKnown RBP18.2■□□□□ 0.5
PTBP1-208ENST00000585956 RNH1P13489 461 aaKnown RBP18.19■□□□□ 0.5
PTBP1-208ENST00000585956 CAPN3P20807 821 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 AHRP35869 848 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 NUP107P57740 925 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 CCZ1BP86790 482 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 CCZ1P86791 482 aaPredicted RBP18.19■□□□□ 0.5
PTBP1-208ENST00000585956 CSHL1Q14406 222 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 RBBP5Q15291 538 aaKnown RBP18.19■□□□□ 0.5
PTBP1-208ENST00000585956 TEDDM1Q5T9Z0 273 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 NXPE4Q6UWF7 544 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 PALM2Q8IXS6 379 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 GPATCH11Q8N954 259 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 B3GNT7Q8NFL0 401 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 TRIM58Q8NG06 486 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 NCLNQ969V3 563 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 TMEM125Q96AQ2 219 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 CSF3RQ99062 836 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 PNO1Q9NRX1 252 aaKnown RBP18.19■□□□□ 0.5
PTBP1-208ENST00000585956 FBXW2Q9UKT8 454 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 SLC22A14Q9Y267 594 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 PSAT1Q9Y617 370 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 ACANP16112 2415 aa18.19■□□□□ 0.5
PTBP1-208ENST00000585956 NPEPPSL1A6NEC2 478 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 FAM166BA8MTA8 275 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 PRAMEF4O60810 478 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 OR6B1O95007 311 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 HIST1H2AGP0C0S8 130 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-208ENST00000585956 HIST1H2ADP20671 130 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 MSX1P28360 303 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 IL2P60568 153 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 BTN3A2P78410 334 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 PRAMEF9Q5VWM5 478 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 VN1R5Q7Z5H4 357 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 CLNKQ7Z7G1 428 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 PPIL6Q8IXY8 311 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 POGLUT1Q8NBL1 392 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 LILRB4Q8NHJ6 448 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 SEC16BQ96JE7 1060 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 HIST1H2AHQ96KK5 128 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 HIST1H2AJQ99878 128 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 H2AFJQ9BTM1 129 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 PELI2Q9HAT8 420 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 PNPLA3Q9NST1 481 aa18.18■□□□□ 0.5
PTBP1-208ENST00000585956 PPIEQ9UNP9 301 aaKnown RBP18.18■□□□□ 0.5
PTBP1-208ENST00000585956 FCHO1O14526 889 aa18.17■□□□□ 0.5
PTBP1-208ENST00000585956 OR2J2O76002 312 aa18.17■□□□□ 0.5
PTBP1-208ENST00000585956 GDF5P43026 501 aa18.17■□□□□ 0.5
PTBP1-208ENST00000585956 AP1S2P56377 157 aa18.17■□□□□ 0.5
PTBP1-208ENST00000585956 PMPCAQ10713 525 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms