RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 HNF4AP41235 474 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 CLCN2P51788 898 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 NR0B1P51843 470 aaKnown RBP13.49□□□□□ -0.25
SDF2-202ENST00000585428 CRYMQ14894 314 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 TERF2Q15554 542 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 TEDDM1Q5T9Z0 273 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 RNASEH2BQ5TBB1 312 aaKnown RBP13.49□□□□□ -0.25
SDF2-202ENST00000585428 NXPE4Q6UWF7 544 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 CD163Q86VB7 1156 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 PPIL6Q8IXY8 311 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 CA13Q8N1Q1 262 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 UCK2Q9BZX2 261 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 PELI2Q9HAT8 420 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 PLAC1Q9HBJ0 212 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 NPDC1Q9NQX5 325 aaPredicted RBP13.49□□□□□ -0.25
SDF2-202ENST00000585428 IKZF3Q9UKT9 509 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 RNF6Q9Y252 685 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 ZFHX3Q15911 3703 aa13.49□□□□□ -0.25
SDF2-202ENST00000585428 ITGA10O75578 1167 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 PDE9AO76083 593 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 GUCA1CO95843 209 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 ENO2P09104 434 aaPredicted RBP13.48□□□□□ -0.25
SDF2-202ENST00000585428 CHRNB4P30926 498 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 REEP5Q00765 189 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 RUNX2Q13950 521 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 KRTAP21-3Q3LHN1 58 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 MSS51Q4VC12 460 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 HECTD2Q5U5R9 776 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 ARHGAP11AQ6P4F7 1023 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 SBSNQ6UWP8 590 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 THOC6Q86W42 341 aaKnown RBP13.48□□□□□ -0.25
SDF2-202ENST00000585428 IGDCC3Q8IVU1 814 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 SCUBE1Q8IWY4 988 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 DMRTC2Q8IXT2 367 aaPredicted RBP13.48□□□□□ -0.25
SDF2-202ENST00000585428 CYP4Z2PQ8N1L4 340 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 TMEM156Q8N614 296 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 ARMC2Q8NEN0 867 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 GABPB2Q8TAK5 448 aaPredicted RBP13.48□□□□□ -0.25
SDF2-202ENST00000585428 RND1Q92730 232 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 PBKQ96KB5 322 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 TSNARE1Q96NA8 513 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 RHBGQ9H310 441 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 TP63Q9H3D4 680 aaPredicted RBP13.48□□□□□ -0.25
SDF2-202ENST00000585428 DEPPQ9NTK1 212 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 SLC22A14Q9Y267 594 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 YARS2Q9Y2Z4 477 aaKnown RBP13.48□□□□□ -0.25
SDF2-202ENST00000585428 MMACHCQ9Y4U1 282 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 GTF3C1Q12789 2109 aa13.48□□□□□ -0.25
SDF2-202ENST00000585428 TRBV11-1A0A0K0K1C0 115 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 NKX2-6A6NCS4 301 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 USP27XA6NNY8 438 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 FOXO6A8MYZ6 492 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 PSMD12O00232 456 aaPredicted RBP13.47□□□□□ -0.25
SDF2-202ENST00000585428 PRKNO60260 465 aaPredicted RBP13.47□□□□□ -0.25
SDF2-202ENST00000585428 MYO1DO94832 1006 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 HOXD4P09016 255 aaPredicted RBP13.47□□□□□ -0.25
SDF2-202ENST00000585428 MSX1P28360 303 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 GPR85P60893 370 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 BTN3A2P78410 334 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 PMPCAQ10713 525 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 RBBP5Q15291 538 aaKnown RBP13.47□□□□□ -0.25
SDF2-202ENST00000585428 PPP1R3AQ16821 1122 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 GXYLT1Q4G148 440 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 XKR6Q5GH73 641 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 SPANXN3Q5MJ09 141 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 RPRMLQ8N4K4 120 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 ANKRD7Q92527 254 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 AIF1LQ9BQI0 150 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 NAT9Q9BTE0 207 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 NPLQ9BXD5 320 aaPredicted RBP13.47□□□□□ -0.25
SDF2-202ENST00000585428 DEFB127Q9H1M4 99 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 KCNJ16Q9NPI9 418 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 KCMF1Q9P0J7 381 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 KCNE2Q9Y6J6 123 aa13.47□□□□□ -0.25
SDF2-202ENST00000585428 NF1P21359 2839 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 LRIT2A6NDA9 550 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 TGFBR3LH3BV60 316 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 CDC40O60508 579 aaKnown RBP eCLIP13.46□□□□□ -0.25
SDF2-202ENST00000585428 BANF1O75531 89 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 ZFAND5O76080 213 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 CD1EP15812 388 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 SSR4P51571 173 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 HSD17B7P56937 341 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 BBS9Q3SYG4 887 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 TOR1AIP1Q5JTV8 583 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 C16orf47Q6ZP98 133 aaPredicted RBP13.46□□□□□ -0.25
SDF2-202ENST00000585428 CERS2Q96G23 380 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 VMP1Q96GC9 406 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 PDLIM2Q96JY6 352 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 ZDHHC11Q9H8X9 412 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 TIMMDC1Q9NPL8 285 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 PNO1Q9NRX1 252 aaKnown RBP13.46□□□□□ -0.25
SDF2-202ENST00000585428 CORO1CQ9ULV4 474 aaPredicted RBP13.46□□□□□ -0.25
SDF2-202ENST00000585428 DYRK1BQ9Y463 629 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 JRKLQ9Y4A0 524 aa13.46□□□□□ -0.25
SDF2-202ENST00000585428 CCDC168Q8NDH2 2452 aa13.46□□□□□ -0.26
SDF2-202ENST00000585428 C2CD3Q4AC94 2353 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 PINLYPA6NC86 204 aa13.45□□□□□ -0.26
SDF2-202ENST00000585428 PABPN1LA6NDY0 278 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms