RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ROS1P08922 2347 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 ACACAQ13085 2346 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 LOC105369274A0A096LPK9 316 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 LOC102723532A0A0G2JNH3 316 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 PRSS38A1L453 326 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 CPED1A4D0V7 1026 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 G3V2T6 193 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 PI15O43692 258 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 TMPRSS11DO60235 418 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 PDGFBP01127 241 aaPredicted RBP9.83□□□□□ -0.84
RFFL-212ENST00000584655 FAM58BPP0C7Q3 252 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 OR12D1P0DN82 309 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 NR2F1P10589 423 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 C5AR1P21730 350 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 KELP23276 732 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 SPIBQ01892 262 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 SLAMF1Q13291 335 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 ADAM15Q13444 863 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 KCTD21Q4G0X4 260 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 PAGE2BQ5JRK9 111 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 TMEM179BQ7Z7N9 219 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 DCUN1D3Q8IWE4 304 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 OR4N4Q8N0Y3 316 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 HSPA12BQ96MM6 686 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 COL21A1Q96P44 957 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 ASPSCR1Q9BZE9 553 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 HCN3Q9P1Z3 774 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 RIMKLBQ9ULI2 386 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 PCDHA9Q9Y5H5 950 aa9.83□□□□□ -0.84
RFFL-212ENST00000584655 H3BN98 237 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 TOR1BO14657 336 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 KMOO15229 486 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 CDH3P22223 829 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 PRDX6P30041 224 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 SLC7A1P30825 629 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 HPCAL1P37235 193 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 KIR2DL1P43626 348 aaPredicted RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 HNMTP50135 292 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 CDK9P50750 372 aaKnown RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 CHN2P52757 468 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 LEXMQ3ZCV2 418 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 CWF19L1Q69YN2 538 aaKnown RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 CLVS1Q8IUQ0 354 aaPredicted RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 EPHX4Q8IUS5 362 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 OR2L2Q8NH16 312 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 RSC1A1Q92681 617 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 HSH2DQ96JZ2 352 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 EBF1Q9UH73 591 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 KLF15Q9UIH9 416 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 MKLN1Q9UL63 735 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.82□□□□□ -0.84
RFFL-212ENST00000584655 SLC27A6Q9Y2P4 619 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 PLXNA3P51805 1871 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 H3BSH0 61 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 LIN7AO14910 233 aaPredicted RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 HCRTR1O43613 425 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 CH25HO95992 272 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 FOSL2P15408 326 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 AVPR1BP47901 424 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 ACADVLP49748 655 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 GPR19Q15760 415 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 C6orf132Q5T0Z8 1188 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 GPR107Q5VW38 600 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 KRT78Q8N1N4 520 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 TGM7Q96PF1 710 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 IL4I1Q96RQ9 567 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 ADI1Q9BV57 179 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 TTTY10Q9BZA0 68 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 SYNPO2LQ9H987 977 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 ZIM2Q9NZV7 527 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 PLPP1O14494 284 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 AHCYL1O43865 530 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 SOX30O94993 753 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 IGFBP1P08833 259 aaPredicted RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 JUNDP17535 347 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 GABRG2P18507 467 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 VLDLRP98155 873 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 MAD2L1Q13257 205 aaPredicted RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 AASDHQ4L235 1098 aaPredicted RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 CLEC12AQ5QGZ9 265 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 C1orf189Q5VU69 101 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 ZNF557Q8N988 423 aaPredicted RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 OR9Q2Q8NGE9 314 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 C16orf78Q8WTQ4 265 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 GLMNQ92990 594 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 NTMT1Q9BV86 223 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 KCMF1Q9P0J7 381 aa9.82□□□□□ -0.84
RFFL-212ENST00000584655 RUVBL1Q9Y265 456 aaKnown RBP9.82□□□□□ -0.84
RFFL-212ENST00000584655 C5orf67F2Z3F1 127 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 RPS9P46781 194 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 GPR18Q14330 331 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 KIAA0040Q15053 153 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 NHSL2Q5HYW2 709 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 KIAA1614Q5VZ46 1190 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 ARMC6Q6NXE6 501 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 CEP68Q76N32 757 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 ARHGAP22Q7Z5H3 698 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 BCDIN3DQ7Z5W3 292 aaKnown RBP9.81□□□□□ -0.84
RFFL-212ENST00000584655 CLIP4Q8N3C7 705 aa9.81□□□□□ -0.84
RFFL-212ENST00000584655 TRPV3Q8NET8 790 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms