RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 REEP5Q00765 189 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 MEF2AQ02078 507 aaPredicted RBP10.46□□□□□ -0.73
CCDC47-206ENST00000584112 ZNF33BQ06732 778 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 FASTKD3Q14CZ7 662 aaKnown RBP10.46□□□□□ -0.73
CCDC47-206ENST00000584112 PPP1R3AQ16821 1122 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 BTBD16Q32M84 506 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 CATSPEREQ5SY80 951 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 HMBOX1Q6NT76 420 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 GFRALQ6UXV0 394 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 LANCL3Q6ZV70 420 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 MAATS1Q7Z4T9 603 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 ANKRD37Q7Z713 158 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 THOC6Q86W42 341 aaKnown RBP10.46□□□□□ -0.73
CCDC47-206ENST00000584112 PDSS2Q86YH6 399 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 CIARTQ8N365 385 aaPredicted RBP10.46□□□□□ -0.73
CCDC47-206ENST00000584112 AFAP1L2Q8N4X5 818 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 ZNF740Q8NDX6 193 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 PLPP5Q8NEB5 264 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 CATSPER1Q8NEC5 780 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 TRPV3Q8NET8 790 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 NT5CQ8TCD5 201 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 PYROXD1Q8WU10 500 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 CDKL2Q92772 493 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 PEX11GQ96HA9 241 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 ZNF354BQ96LW1 612 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 MAGEB10Q96LZ2 347 aaPredicted RBP10.46□□□□□ -0.73
CCDC47-206ENST00000584112 EGFL8Q99944 293 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 CLK4Q9HAZ1 481 aaKnown RBP10.46□□□□□ -0.73
CCDC47-206ENST00000584112 OLAHQ9NV23 265 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 PLA2G3Q9NZ20 509 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 TXNDC16Q9P2K2 825 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 CTNNAL1Q9UBT7 734 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 ZFP69BQ9UJL9 534 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 SNX24Q9Y343 169 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 OARD1Q9Y530 152 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 KCNE2Q9Y6J6 123 aa10.46□□□□□ -0.73
CCDC47-206ENST00000584112 HCFC1P51610 2035 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 OR5H15A6NDH6 313 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 NPEPPSL1A6NEC2 478 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 FAM171A2A8MVW0 826 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 MAGEB17A8MXT2 336 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 EIF3HO15372 352 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCDC47-206ENST00000584112 GALR3O60755 368 aaPredicted RBP10.45□□□□□ -0.74
CCDC47-206ENST00000584112 WDPCPO95876 746 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 AGAP20933 346 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 DNASE1P24855 282 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 SCTRP47872 440 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 POU4F1Q01851 419 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 ACTN3Q08043 901 aaPredicted RBP10.45□□□□□ -0.74
CCDC47-206ENST00000584112 ABRAXAS2Q15018 415 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 NSDHLQ15738 373 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 DEFB134Q4QY38 66 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 NXPE4Q6UWF7 544 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 TMEM207Q6UWW9 146 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 TMPRSS11BQ86T26 416 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 M1APQ8TC57 530 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 TBC1D20Q96BZ9 403 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 TSPAN17Q96FV3 270 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 TSNARE1Q96NA8 513 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 LPAR4Q99677 370 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF559Q9BR84 538 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 ERP44Q9BS26 406 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 KCNK13Q9HB14 408 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 GPAMQ9HCL2 828 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 LANCL2Q9NS86 450 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 STMN3Q9NZ72 180 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 WHRNQ9P202 907 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 ABI3Q9P2A4 366 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 PYCARDQ9ULZ3 195 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 SLC22A14Q9Y267 594 aa10.45□□□□□ -0.74
CCDC47-206ENST00000584112 DNAJC13O75165 2243 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 IGHV3-20A0A0C4DH32 117 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF860A6NHJ4 632 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 CDC7O00311 574 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 PRAMEF2O60811 474 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 CDC123O75794 336 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-206ENST00000584112 F10P00742 488 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 CRYABP02511 175 aaKnown RBP10.44□□□□□ -0.74
CCDC47-206ENST00000584112 FHP07954 510 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF888P0CJ79 500 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-206ENST00000584112 GNAZP19086 355 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 SMSP52788 366 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 DGKQP52824 942 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 STXBP1P61764 594 aaKnown RBP10.44□□□□□ -0.74
CCDC47-206ENST00000584112 RHAGQ02094 409 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF460Q14592 562 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 MEP1AQ16819 746 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 SFT2D3Q587I9 215 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 H3F3CQ6NXT2 135 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 PAPD4Q6PIY7 484 aaKnown RBP10.44□□□□□ -0.74
CCDC47-206ENST00000584112 CAPN12Q6ZSI9 719 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 KRTAP1-3Q8IUG1 177 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 TCAIMQ8N3R3 496 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 TTLQ8NG68 377 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 UTP15Q8TED0 518 aaKnown RBP10.44□□□□□ -0.74
CCDC47-206ENST00000584112 NR4A3Q92570 626 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 CPNE1Q99829 537 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 RBCK1Q9BYM8 510 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 SLC6A16Q9GZN6 736 aa10.44□□□□□ -0.74
CCDC47-206ENST00000584112 DERL2Q9GZP9 239 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms