RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ZNF33BQ06732 778 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 CCDC153Q494R4 210 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 HHATQ5VTY9 493 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 MTFR2Q6P444 385 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 KLC3Q6P597 504 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 LINGO1Q96FE5 620 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 IMMP1LQ96LU5 166 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 OR2A5Q96R48 311 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 NMRAL1Q9HBL8 299 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 MRPS30Q9NP92 439 aaKnown RBP19.34■□□□□ 0.69
SRSF1-206ENST00000583741 INTS9Q9NV88 658 aaKnown RBP19.34■□□□□ 0.69
SRSF1-206ENST00000583741 EMCNQ9ULC0 261 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 A0A0A6YYC8 382 aaPredicted RBP19.33■□□□□ 0.68
SRSF1-206ENST00000583741 ARHGEF33A8MVX0 844 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 I3L1I5 382 aaPredicted RBP19.33■□□□□ 0.68
SRSF1-206ENST00000583741 PLIN3O60664 434 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 SLC19A2O60779 497 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 RGS4P49798 205 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 MAT1AQ00266 395 aaKnown RBP19.33■□□□□ 0.68
SRSF1-206ENST00000583741 GBX1Q14549 363 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 NAA25Q14CX7 972 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 CDSNQ15517 529 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.33■□□□□ 0.682e-8■■■□□ 14.7
SRSF1-206ENST00000583741 ABHD17BQ5VST6 288 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 ZNF425Q6IV72 752 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 LRRC8EQ6NSJ5 796 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 ZNF295-AS1Q8N0V1 137 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 SHISA5Q8N114 240 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 CCDC63Q8NA47 563 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 ARMC2Q8NEN0 867 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 MAGEC3Q8TD91 643 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 EEF1AKMT1Q8WVE0 214 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 SCYL1Q96KG9 808 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 GPR78Q96P69 363 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 DERL2Q9GZP9 239 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 TINAGQ9UJW2 476 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 MKL2Q9ULH7 1088 aa19.33■□□□□ 0.68
SRSF1-206ENST00000583741 P2RX6O15547 441 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 TSPAN12O95859 305 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 PROCP04070 461 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 ANXA5P08758 320 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 CD1DP15813 335 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 ETV4P43268 484 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 WDR4P57081 412 aaKnown RBP19.32■□□□□ 0.68
SRSF1-206ENST00000583741 ACAP2Q15057 778 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 C3AR1Q16581 482 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 OR9A1PQ8NGU1 263 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 SUN3Q8TAQ9 357 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 DYDC1Q8WWB3 177 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 SMPDL3AQ92484 453 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 PAIP2Q9BPZ3 127 aaKnown RBP19.32■□□□□ 0.68
SRSF1-206ENST00000583741 TUBB6Q9BUF5 446 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 DRC3Q9H069 523 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 STMN3Q9NZ72 180 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 TAC3Q9UHF0 121 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 MED13LQ71F56 2210 aa19.32■□□□□ 0.68
SRSF1-206ENST00000583741 IGHV3-20A0A0C4DH32 117 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 C19orf84I3L1E1 186 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 MYO1CO00159 1063 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 SEC24DO94855 1032 aaPredicted RBP19.31■□□□□ 0.68
SRSF1-206ENST00000583741 TFEBP19484 476 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 ATP6V0D1P61421 351 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 GUCY1A3Q02108 690 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 RBPJQ06330 500 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 TSTA3Q13630 321 aaPredicted RBP19.31■□□□□ 0.68
SRSF1-206ENST00000583741 ACSBG2Q5FVE4 666 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 GARNL3Q5VVW2 1013 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 PDLIM5Q96HC4 596 aaKnown RBP19.31■□□□□ 0.68
SRSF1-206ENST00000583741 XPR1Q9UBH6 696 aa19.31■□□□□ 0.68
SRSF1-206ENST00000583741 EIF3FO00303 357 aaPredicted RBP19.3■□□□□ 0.68
SRSF1-206ENST00000583741 ZBTB14O43829 449 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 RBP1P09455 135 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 DHRS4L1P0CG22 281 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 C8orf89P0DMQ9 161 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 ICAM2P13598 275 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 ENO3P13929 434 aaPredicted RBP19.3■□□□□ 0.68
SRSF1-206ENST00000583741 MDH1P40925 334 aaKnown RBP19.3■□□□□ 0.68
SRSF1-206ENST00000583741 ZNF766Q5HY98 468 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 TECRLQ5HYJ1 363 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 ICE2Q659A1 982 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 FCRLBQ6BAA4 426 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 XKRXQ6PP77 449 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 LANCL3Q6ZV70 420 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 MYO1HQ8N1T3 1032 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 PPFIBP2Q8ND30 876 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 RERGQ96A58 199 aaPredicted RBP19.3■□□□□ 0.68
SRSF1-206ENST00000583741 MRPL57Q9BQC6 102 aaKnown RBP19.3■□□□□ 0.68
SRSF1-206ENST00000583741 VN1R1Q9GZP7 353 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 MRPL46Q9H2W6 279 aaKnown RBP19.3■□□□□ 0.68
SRSF1-206ENST00000583741 MID2Q9UJV3 735 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 ITGB1BP2Q9UKP3 347 aa19.3■□□□□ 0.68
SRSF1-206ENST00000583741 A8MUI8 341 aa19.29■□□□□ 0.68
SRSF1-206ENST00000583741 PSIP1O75475 530 aaKnown RBP19.29■□□□□ 0.68
SRSF1-206ENST00000583741 STATHP02808 62 aa19.29■□□□□ 0.68
SRSF1-206ENST00000583741 EZRP15311 586 aaKnown RBP19.29■□□□□ 0.68
SRSF1-206ENST00000583741 SERPINB4P48594 390 aa19.29■□□□□ 0.68
SRSF1-206ENST00000583741 ST13P50502 369 aaKnown RBP19.29■□□□□ 0.68
SRSF1-206ENST00000583741 AP2B1P63010 937 aa19.29■□□□□ 0.68
SRSF1-206ENST00000583741 PRDX1Q06830 199 aaKnown RBP19.29■□□□□ 0.68
SRSF1-206ENST00000583741 PIWIL4Q7Z3Z4 852 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms