RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 TRBC2A0A5B9 178 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 CCDC154A6NI56 674 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 ANGPT2O15123 496 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 CLEC3AO75596 197 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 MYO1DO94832 1006 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 CTSEP14091 401 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 JUNDP17535 347 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 SDC1P18827 310 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 PRPS1L1P21108 318 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 AHRP35869 848 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 GSTM5P46439 218 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 ASMTP46597 345 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 DUSP3P51452 185 aaPredicted RBP11.4□□□□□ -0.58
GGA3-217ENST00000583667 PSME3P61289 254 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 ACSM2AQ08AH3 577 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 ELOCQ15369 112 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 DPY19L1Q2PZI1 675 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 VPS26BQ4G0F5 336 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 PIGGQ5H8A4 983 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 DEPDC1Q5TB30 811 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 ACSM2BQ68CK6 577 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 ZNF425Q6IV72 752 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 OGFOD3Q6PK18 319 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 VN1R5Q7Z5H4 357 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 ADGRF3Q8IZF5 1079 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 METTL4Q8N3J2 472 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 LIX1Q8N485 282 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 OR2L3Q8NG85 312 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 FLVCR1-AS1Q8TAF5 88 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 MTERF1Q99551 399 aaKnown RBP11.4□□□□□ -0.58
GGA3-217ENST00000583667 NPAS2Q99743 824 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 DPY30Q9C005 99 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 TCEAL2Q9H3H9 227 aaPredicted RBP11.4□□□□□ -0.58
GGA3-217ENST00000583667 DENND2DQ9H6A0 471 aaPredicted RBP11.4□□□□□ -0.58
GGA3-217ENST00000583667 AHSPQ9NZD4 102 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 TMEM181Q9P2C4 612 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 CPNE7Q9UBL6 633 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 DLGAP4Q9Y2H0 992 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 POLR3HQ9Y535 204 aaPredicted RBP11.4□□□□□ -0.58
GGA3-217ENST00000583667 PCDHGA7Q9Y5G6 932 aa11.4□□□□□ -0.58
GGA3-217ENST00000583667 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.4□□□□□ -0.58
GGA3-217ENST00000583667 ZFHX3Q15911 3703 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 IGKV1-8A0A0C4DH67 115 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 ASPDHA6ND91 283 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 H7BY64 318 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 ETHE1O95571 254 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 TBX6O95947 436 aaPredicted RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 VIPP01282 170 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 CHRM5P08912 532 aaPredicted RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 CMPK1P30085 196 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 PEBP1P30086 187 aaKnown RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 ACTR3P61158 418 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 HNRNPKP61978 463 aaKnown RBP eCLIP11.39□□□□□ -0.59
GGA3-217ENST00000583667 RPS13P62277 151 aaKnown RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 RAE1P78406 368 aaKnown RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 SRSF11Q05519 484 aaKnown RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 ZIC1Q15915 447 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 ISXQ2M1V0 245 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 C6orf163Q5TEZ5 329 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 BNC2Q6ZN30 1099 aaPredicted RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 CAMKMTQ7Z624 323 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 TAF8Q7Z7C8 310 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 SLC9B2Q86UD5 537 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 C10orf67Q8IYJ2 551 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 NAGSQ8N159 534 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 TBC1D19Q8N5T2 526 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 ZNF740Q8NDX6 193 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 PRAP1Q96NZ9 151 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 CDRT15Q96T59 188 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 LRRC61Q9BV99 259 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 MS4A8Q9BY19 250 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 SPNS1Q9H2V7 528 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 SRMSQ9H3Y6 488 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 ZNF768Q9H5H4 540 aaKnown RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 XKR8Q9H6D3 395 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 CUEDC1Q9NWM3 386 aaPredicted RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 ABCD2Q9UBJ2 740 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 SPASTQ9UBP0 616 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 CD300AQ9UGN4 299 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 APOBEC3BQ9UH17 382 aaKnown RBP11.39□□□□□ -0.59
GGA3-217ENST00000583667 ADAM29Q9UKF5 820 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 CSNK1G3Q9Y6M4 447 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 OTOGQ6ZRI0 2925 aa11.39□□□□□ -0.59
GGA3-217ENST00000583667 CRYBG3Q68DQ2 2970 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 C15orf38-AP3S2A0A0A6YYH1 394 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 PRAMEF33A0A0G2JMD5 474 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 PMS2P1A4D2B8 440 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 ANKDD1BA6NHY2 528 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 FXYD1O00168 92 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 NR5A2O00482 541 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 NOBOXO60393 691 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 CIB2O75838 187 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 PCNAP12004 261 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 TIA1P31483 386 aaKnown RBP eCLIP11.38□□□□□ -0.59
GGA3-217ENST00000583667 GRK3P35626 688 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 CASRP41180 1078 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 FASLGP48023 281 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 YBX1P67809 324 aaKnown RBP11.38□□□□□ -0.59
GGA3-217ENST00000583667 DAB2P98082 770 aa11.38□□□□□ -0.59
GGA3-217ENST00000583667 LRRC74AQ0VAA2 488 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms